RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 GEMIN7Q9H840 131 aaKnown RBP16.35■□□□□ 0.21
LMO4-202ENST00000370544 OTORQ9NRC9 128 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 TCF21O43680 179 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 SRSF7Q16629 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMO4-202ENST00000370544 PVRIGQ6DKI7 326 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 YAE1D1Q9NRH1 226 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 F11RQ9Y624 299 aaKnown RBP16.35■□□□□ 0.21
LMO4-202ENST00000370544 ZSWIM8A7E2V4 1837 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 A0A1B0GUT8 65 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 FBLL1A6NHQ2 334 aaKnown RBP16.34■□□□□ 0.21
LMO4-202ENST00000370544 IGKV1-27A0A075B6S5 117 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 LOC102724200A0A096LPH7 203 aaPredicted RBP16.34■□□□□ 0.21
LMO4-202ENST00000370544 H7C1H1 209 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 CD55P08174 381 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 SOD3P08294 240 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 TAS2R60P59551 318 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 PRCDQ00LT1 54 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 ERASQ7Z444 233 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 FAM90A9PA6NNJ1 464 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 PRSS2P07478 247 aa16.34■□□□□ 0.21
LMO4-202ENST00000370544 DICER1Q9UPY3 1922 aaKnown RBP16.34■□□□□ 0.21
LMO4-202ENST00000370544 CIRBPQ14011 172 aaKnown RBP16.34■□□□□ 0.21
LMO4-202ENST00000370544 MUC21A0A0G2JKD1 596 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 MUC21A0A140T8X8 626 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 SRRM5B3KS81 715 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 H0YIZ8 118 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 DDTP30046 118 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 ID3Q02535 119 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 MUC21Q5SSG8 566 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 TMEM136Q6ZRR5 245 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 DUX3Q96PT4 197 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 IMMP2LQ96T52 175 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 SOX21Q9Y651 276 aaPredicted RBP16.33■□□□□ 0.21
LMO4-202ENST00000370544 MDS2Q8NDY4 140 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 NPFFR1Q9GZQ6 430 aa16.33■□□□□ 0.21
LMO4-202ENST00000370544 GAGE10A6NGK3 116 aa16.33■□□□□ 0.2
LMO4-202ENST00000370544 SBF1O95248 1867 aa16.33■□□□□ 0.2
LMO4-202ENST00000370544 A0A087WWC5 75 aa16.33■□□□□ 0.2
LMO4-202ENST00000370544 TIMM23O14925 209 aa16.33■□□□□ 0.2
LMO4-202ENST00000370544 RNASE4P34096 147 aaKnown RBP16.33■□□□□ 0.2
LMO4-202ENST00000370544 PNRC2Q9NPJ4 139 aaKnown RBP16.32■□□□□ 0.2
LMO4-202ENST00000370544 PEMTQ9UBM1 199 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 MEIG1Q5JSS6 88 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 ARL6IP6Q8N6S5 226 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 TNFRSF18Q9Y5U5 241 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 A0A1W2PRX2 142 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 TCRBV4S1A1TA0A5B7 111 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 TNFRSF14Q92956 283 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 RNF125Q96EQ8 232 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 VDAC2P45880 294 aaPredicted RBP16.32■□□□□ 0.2
LMO4-202ENST00000370544 COPS9Q8WXC6 57 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 GNG5P63218 68 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 Q6AWC8 147 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 BMPERQ8N8U9 685 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 ZNF414Q96IQ9 312 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 TUBA4BQ9H853 241 aa16.32■□□□□ 0.2
LMO4-202ENST00000370544 PLAURQ03405 335 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 F8VVB4 439 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 F8VWA3 439 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 APOHP02749 345 aaPredicted RBP16.31■□□□□ 0.2
LMO4-202ENST00000370544 REC114Q7Z4M0 266 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 FER1L6-AS1Q8NA97 138 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 A0A1B0GW15 77 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 PPP1R17O96001 155 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 ZNF672Q499Z4 452 aaPredicted RBP16.31■□□□□ 0.2
LMO4-202ENST00000370544 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 ALPK2Q86TB3 2170 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 TRAV9-1A0A075B6T8 112 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 IZUMO1RA6ND01 250 aa16.31■□□□□ 0.2
LMO4-202ENST00000370544 PAX1P15863 534 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 RPL23P62829 140 aaKnown RBP16.3■□□□□ 0.2
LMO4-202ENST00000370544 LEMD1Q68G75 181 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 ZNF418Q8TF45 676 aaPredicted RBP16.3■□□□□ 0.2
LMO4-202ENST00000370544 TMEM262E9PQX1 116 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 RHOGP84095 191 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 SAMD13Q5VXD3 122 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 C18orf15Q96N68 181 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 PMCHL2Q9BQD1 86 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 ZNF256Q9Y2P7 627 aaPredicted RBP16.3■□□□□ 0.2
LMO4-202ENST00000370544 SCN8AQ9UQD0 1980 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 PRSS22Q9GZN4 317 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 TMEM160Q9NX00 188 aa16.3■□□□□ 0.2
LMO4-202ENST00000370544 JOSD1Q15040 202 aaPredicted RBP16.3■□□□□ 0.2
LMO4-202ENST00000370544 KCNS1Q96KK3 526 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 SLC50A1Q9BRV3 221 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 RPUSD1Q9UJJ7 312 aaKnown RBP16.29■□□□□ 0.2
LMO4-202ENST00000370544 DPRXA6NFQ7 191 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 WFDC1Q9HC57 220 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 LDLRAD4O15165 306 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 SELLP14151 372 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 MYOD1P15172 320 aa16.29■□□□□ 0.2
LMO4-202ENST00000370544 PSMB11A5LHX3 300 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 LINC00518Q8N0U6 118 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 CCL20P78556 96 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 B3GALT5-AS1P59052 145 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 SUMO2P61956 95 aaKnown RBP16.28■□□□□ 0.2
LMO4-202ENST00000370544 ZNF600Q6ZNG1 722 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 LINC01587Q99440 93 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 IGHV2-26A0A0B4J1V2 119 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 PYYP10082 97 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms