RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 C18orf32Q8TCD1 76 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 MBD3L1Q8WWY6 194 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF503Q96F45 646 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 C2orf48Q96LS8 159 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 DERL3Q96Q80 235 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 MDFIQ99750 246 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SPIN2AQ99865 258 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SPIN2BQ9BPZ2 258 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 TM2D1Q9BX74 207 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 COMMD5Q9GZQ3 224 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 IFI27L2Q9H2X8 130 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 HES4Q9HCC6 221 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 RARRES3Q9UL19 164 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 FZR1Q9UM11 496 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 WASHC3Q9Y3C0 194 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 MED31Q9Y3C7 131 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OARD1Q9Y530 152 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 ARID1BQ8NFD5 2236 aaPredicted RBP4.16□□□□□ -1.74
UBE3D-202ENST00000369746 DOPEY1Q5JWR5 2465 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 C5orf42Q9H799 3197 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 TRBV5-5A0A0J9YX44 114 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 CCL4P13236 92 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 GP9P14770 177 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 PGCP20142 388 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OR1E2P47887 323 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SGSHP51688 502 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 TFF3Q07654 80 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 EFEMP1Q12805 493 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 PSG7Q13046 419 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 KIAA1644Q3SXP7 199 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OTPQ5XKR4 325 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 NOXRED1Q6NXP6 359 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 RASL11AQ6T310 242 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 RFLNAQ6ZTI6 216 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM256Q8N2U0 113 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 LRTM2Q8N967 370 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 GATD1Q8NB37 220 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SDF2Q99470 211 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 DOPEY2Q9Y3R5 2298 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 BPTFQ12830 3046 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SPEGQ15772 3267 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 TRBV5-7A0A0A0MS05 114 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 HLA-DQA2P01906 255 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 CRYBB3P26998 211 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 HILS1P60008 231 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF85Q03923 595 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 FUT5Q11128 374 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF684Q5T5D7 378 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF880Q6PDB4 577 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 EXOC3-AS1Q8N2X6 119 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 RYBPQ8N488 228 aaPredicted RBP4.15□□□□□ -1.74
UBE3D-202ENST00000369746 OR10G7Q8NGN6 311 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 FAM213BQ8TBF2 198 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF502Q8TBZ5 544 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 Q9H8V8 135 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 KLHL13Q9P2N7 655 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 AK3Q9UIJ7 227 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 KLF12Q9Y4X4 402 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 ABCA12Q86UK0 2595 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 AHCTF1Q8WYP5 2266 aa4.15□□□□□ -1.74
UBE3D-202ENST00000369746 C7orf71A4D174 169 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM150CB9EJG8 249 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 C9JAW5 83 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 H3BTX0 84 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SYNGR1O43759 233 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 PITX3O75364 302 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 LINC00694P0DN24 101 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 CRISP2P16562 243 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 UBE2E1P51965 193 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 LINC00310P59036 64 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 CD226Q15762 336 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SAMD5Q5TGI4 173 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 STAC2Q6ZMT1 411 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 C20orf204Q6ZNR8 217 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF584Q8IVC4 421 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 ZCCHC24Q8N2G6 241 aaKnown RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 LINC01356Q8N9X3 169 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 MRPL30Q8TCC3 161 aaKnown RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 UBE2E3Q969T4 207 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 KCNS1Q96KK3 526 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 UBE2E2Q96LR5 201 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TAAR2Q9P1P5 351 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TP53TG3Q9ULZ0 132 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 HIGD1AQ9Y241 93 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF443Q9Y2A4 671 aaPredicted RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TEX48A0A1B0GUV7 120 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 J3KT08 172 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 RER1O15258 196 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 PIN1P1O15428 100 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 NGFP01138 241 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 CT45A10P0DMU9 189 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SRIP30626 198 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 RBM11P57052 281 aaKnown RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 PPP1CBP62140 327 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 MYBPHQ13203 477 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 Q499Y3 187 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms