RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 HIST1H2BHQ93079 126 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 HIST1H2BNQ99877 126 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 HIST1H2BMQ99879 126 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 GP6Q9HCN6 339 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 FBLN5Q9UBX5 448 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 USF3Q68DE3 2245 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 DOCK4Q8N1I0 1966 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 PINLYPA6NC86 204 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 IGLV3-19P01714 112 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 TMEM30BQ3MIR4 351 aa11.96□□□□□ -0.5
RPS6KC1-202ENST00000366960 C5orf63A6NC05 138 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 PRR31Q5SQ13 230 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 LHFPL4Q7Z7J7 247 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 CRIPAKQ8N1N5 446 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 C21orf62Q9NYP8 219 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 FGF16O43320 207 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 PCNX1Q96RV3 2341 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 GREB1Q4ZG55 1949 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 RPP21Q9H633 154 aaKnown RBP11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 NRN1Q9NPD7 142 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
RPS6KC1-202ENST00000366960 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 TAS2R60P59551 318 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 ABHD17AQ96GS6 310 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 Q9H3A6 140 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 23.8
RPS6KC1-202ENST00000366960 CCL1P22362 96 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 C1QL4Q86Z23 238 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 ADMP35318 185 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 SUPT4H1P63272 117 aaKnown RBP11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 TMEM144Q7Z5S9 345 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 GEMIN7Q9H840 131 aaKnown RBP11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 FOXC2Q99958 501 aa11.94□□□□□ -0.5
RPS6KC1-202ENST00000366960 EFEMP2O95967 443 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 SCGB1A1P11684 91 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 TUBA4BQ9H853 241 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 COX6B1P14854 86 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZIC4Q8N9L1 334 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 RAX2Q96IS3 184 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 RGPD3A6NKT7 1758 aaPredicted RBP11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 CEACAM4O75871 244 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 TGFAP01135 160 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 OR9G9P0C7N8 305 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 SFTPCP11686 197 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 MORN2Q502X0 79 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 FAM181BA6NEQ2 426 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 TM4SF5O14894 197 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 SELLP14151 372 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 RAB9AP51151 201 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 ARID2Q68CP9 1835 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 DOCK6Q96HP0 2047 aa11.93□□□□□ -0.5
RPS6KC1-202ENST00000366960 C17orf100A8MU93 164 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 SFTA2Q6UW10 78 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 PEF1Q9UBV8 284 aaKnown RBP11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 CACNG8Q8WXS5 425 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 SBF2Q86WG5 1849 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 UPK2O00526 184 aa11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 SUMO2P61956 95 aaKnown RBP11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
RPS6KC1-202ENST00000366960 IGKV1-27A0A075B6S5 117 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 CXCL1P09341 107 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 PPP1R17O96001 155 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 PDLIM4P50479 330 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 TMEM170AQ8WVE7 144 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 ZNF236Q9UL36 1845 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 SNRPD3P62318 126 aaKnown RBP11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 HGFACQ04756 655 aa11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 C1orf162Q8NEQ5 155 aaPredicted RBP11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 GREB1LQ9C091 1923 aaPredicted RBP11.91□□□□□ -0.5
RPS6KC1-202ENST00000366960 APOMO95445 188 aa11.9□□□□□ -0.5
RPS6KC1-202ENST00000366960 TYMSP04818 313 aa11.9□□□□□ -0.5
RPS6KC1-202ENST00000366960 C10orf55Q5SWW7 151 aa11.9□□□□□ -0.5
RPS6KC1-202ENST00000366960 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms