RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 KLF13Q9Y2Y9 288 aaPredicted RBP11.13□□□□□ -0.63
PRKN-205ENST00000366897 SAA2-SAA4A0A096LPE2 208 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 A0A1W2PN81 502 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 TNFSF15O95150 251 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 SAA2P0DJI9 122 aaPredicted RBP11.12□□□□□ -0.63
PRKN-205ENST00000366897 RAB31Q13636 194 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 PRR27Q6MZM9 219 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 LYG1Q8N1E2 194 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 IL19Q9UHD0 177 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 DSCAMO60469 2012 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 LINC00614P0C842 121 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 AREGP15514 252 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 ACP1P24666 158 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 CT45A1Q5HYN5 189 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 CT45A3Q8NHU0 189 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
PRKN-205ENST00000366897 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 CD46P15529 392 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 USF1P22415 310 aaPredicted RBP11.11□□□□□ -0.63
PRKN-205ENST00000366897 CD24P25063 80 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
PRKN-205ENST00000366897 Q56UQ5 140 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 DEFB108BQ8NET1 73 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 IDI2-AS1Q9NZ38 188 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 CCL25O15444 150 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 HOXC12P31275 282 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 HES3Q5TGS1 186 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 OR4S2Q8NH73 311 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 SPRY4Q9C004 299 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
PRKN-205ENST00000366897 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
PRKN-205ENST00000366897 APCSP02743 223 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 CBY1Q9Y3M2 126 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 SH2D7A6NKC9 451 aaPredicted RBP11.1□□□□□ -0.63
PRKN-205ENST00000366897 PLAUP00749 431 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 AMY1AP04745 511 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 PYYP10082 97 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 CAMPP49913 170 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 MFAP2P55001 183 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
PRKN-205ENST00000366897 TNXAQ16473 311 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
PRKN-205ENST00000366897 DDB2Q92466 427 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 RND1Q92730 232 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
PRKN-205ENST00000366897 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 PKDREJQ9NTG1 2253 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 J3QR06 171 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 J3QW42 95 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 M0QZ24 198 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 PRRX1P54821 245 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 PMCHL1Q16048 86 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 MOGAT3Q86VF5 341 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 CHODLQ9H9P2 273 aa11.1□□□□□ -0.63
PRKN-205ENST00000366897 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
PRKN-205ENST00000366897 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 SSBP2P81877 361 aaPredicted RBP11.09□□□□□ -0.63
PRKN-205ENST00000366897 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
PRKN-205ENST00000366897 TMEM14BQ9NUH8 114 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 MMP23AO75900 390 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 RNASEKQ6P5S7 137 aaKnown RBP11.09□□□□□ -0.63
PRKN-205ENST00000366897 MRPL52Q86TS9 123 aaKnown RBP11.09□□□□□ -0.63
PRKN-205ENST00000366897 NEUROG1Q92886 237 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
PRKN-205ENST00000366897 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 C20orf202A1L168 122 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 CORTO00230 105 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 SPRY3O43610 288 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 DYSFO75923 2080 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 MT-ND6P03923 174 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 OR2T6Q8NHC8 308 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
PRKN-205ENST00000366897 TMEM167BQ9NRX6 74 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 CLEC5AQ9NY25 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms