RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 RRHO14718 337 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 LTBRP36941 435 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 ID1P41134 155 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 PLP1P60201 277 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 OR13A1Q8NGR1 328 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 CFHR1Q03591 330 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 TNFSF13O75888 250 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 RSPO3Q9BXY4 272 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 MST1LQ2TV78 715 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 LINC01551Q86U37 167 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 GGNQ86UU5 652 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 C1orf194Q5T5A4 169 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 FOXA2Q9Y261 457 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 A0A0G2JMM0 328 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 A0A1W2PPB8 328 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 A0A1W2PRS3 328 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 A0A1W2PS18 150 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 KIR3DP1A8MWS1 328 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 TMEM171Q8WVE6 324 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 TNFSF10P50591 281 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 PLAURQ03405 335 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 HCP5Q6MZN7 132 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 CHCHD1Q96BP2 118 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 CXCL1P09341 107 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 NPIPB3Q92617 1050 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 STAG3L3P0CL85 134 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 EFNA2O43921 213 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 RPP25LQ8N5L8 163 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 OTOGLQ3ZCN5 2332 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 A1L4Q6 167 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
CDC42BPA-202ENST00000366764 ATP5G3P48201 142 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGFBP2P18065 325 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 WDR82Q6UXN9 313 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 PLPPR1Q8TBJ4 325 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 PCP4P48539 62 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 SRSF12Q8WXF0 261 aaKnown RBP9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 B9A039 149 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 FAM157AC9JC47 383 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 ATP5LO75964 103 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 GOLT1AQ6ZVE7 132 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 OR4C46A6NHA9 309 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 UCNP55089 124 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 EFNB3Q15768 340 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 MORN2Q502X0 79 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 SLC17A3O00476 420 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 SS18L1O75177 396 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 ZFP36L1Q07352 338 aaKnown RBP9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 NEUROG1Q92886 237 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 WNT9BO14905 357 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 RABAC1Q9UI14 185 aa9.87□□□□□ -0.83
CDC42BPA-202ENST00000366764 PYY3Q5JQD4 70 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 RALYQ9UKM9 306 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 ZNRF1Q8ND25 227 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 HES7Q9BYE0 225 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 PIEZO2Q9H5I5 2752 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 UPK2O00526 184 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 LINC00614P0C842 121 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 GPR6P46095 362 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 C19orf67A6NJJ6 358 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 PPBPP02775 128 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 C1orf147Q96MC9 270 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 PLAUP00749 431 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 AREGP15514 252 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 DLX1P56177 255 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 RTN4RL2Q86UN3 420 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 SAA2-SAA4A0A096LPE2 208 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 SAA2P0DJI9 122 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 ZNF124Q15973 351 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 NIT1Q86X76 327 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 OR10J6PQ8NGY7 276 aa9.86□□□□□ -0.83
CDC42BPA-202ENST00000366764 PSMB2P49721 201 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 SLC25A48Q6ZT89 311 aaKnown RBP9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 TCRBV4S1A1TA0A5B7 111 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 GDF9O60383 454 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 GFRA1P56159 465 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 FAM90A27PA6NNH2 459 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 ARF6P62330 175 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 CLEC5AQ9NY25 188 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 RNF115Q9Y4L5 304 aa9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms