RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 IZUMO4Q1ZYL8 232 aa17.69■□□□□ 0.42
SHC1-201ENST00000366442 DYNC2H1Q8NCM8 4307 aaKnown RBP17.69■□□□□ 0.42
SHC1-201ENST00000366442 C15orf62A8K5M9 175 aa17.68■□□□□ 0.42
SHC1-201ENST00000366442 MFAP4P55083 255 aa17.68■□□□□ 0.42
SHC1-201ENST00000366442 RELQ04864 619 aaPredicted RBP17.68■□□□□ 0.42
SHC1-201ENST00000366442 IL18Q14116 193 aa17.68■□□□□ 0.42
SHC1-201ENST00000366442 TRIM16LQ309B1 348 aa17.68■□□□□ 0.42
SHC1-201ENST00000366442 SPAG8Q99932 426 aaPredicted RBP17.68■□□□□ 0.42
SHC1-201ENST00000366442 DISC1C4P0D8 188 aa17.67■□□□□ 0.42
SHC1-201ENST00000366442 NUPL2O15504 423 aaKnown RBP17.67■□□□□ 0.42
SHC1-201ENST00000366442 MT-CO2P00403 227 aa17.67■□□□□ 0.42
SHC1-201ENST00000366442 SP6Q3SY56 376 aa17.67■□□□□ 0.42
SHC1-201ENST00000366442 SLC35G3Q8N808 338 aa17.67■□□□□ 0.42
SHC1-201ENST00000366442 C20orf24Q9BUV8 137 aa17.67■□□□□ 0.42
SHC1-201ENST00000366442 C14orf166Q9Y224 244 aaKnown RBP17.67■□□□□ 0.42
SHC1-201ENST00000366442 CSMD3Q7Z407 3707 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 TSPAN4O14817 238 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 ST8SIA3O43173 380 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 NOL3O60936 208 aaKnown RBP17.66■□□□□ 0.42
SHC1-201ENST00000366442 AKAIN1P0CW23 69 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 LAMTOR1Q6IAA8 161 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 FAAP20Q6NZ36 180 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 RRNAD1Q96FB5 475 aaKnown RBP17.66■□□□□ 0.42
SHC1-201ENST00000366442 RTBDNQ9BSG5 229 aaPredicted RBP17.66■□□□□ 0.42
SHC1-201ENST00000366442 PDCD10Q9BUL8 212 aa17.66■□□□□ 0.42
SHC1-201ENST00000366442 SLIRPQ9GZT3 109 aaKnown RBP17.66■□□□□ 0.42
SHC1-201ENST00000366442 C6orf62Q9GZU0 229 aaPredicted RBP17.66■□□□□ 0.42
SHC1-201ENST00000366442 H3BMQ9 156 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 GSTZ1O43708 216 aaPredicted RBP17.65■□□□□ 0.42
SHC1-201ENST00000366442 CDS2O95674 445 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 IFNA17P01571 189 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 SNCAP37840 140 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 PVRIGQ6DKI7 326 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 OR4C16Q8NGL9 310 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 ZNF414Q96IQ9 312 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 NXF2Q9GZY0 626 aaKnown RBP17.65■□□□□ 0.42
SHC1-201ENST00000366442 TMEM222Q9H0R3 208 aa17.65■□□□□ 0.42
SHC1-201ENST00000366442 SPINK9Q5DT21 86 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 FAM219AQ8IW50 185 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 PINX1Q96BK5 328 aaKnown RBP17.64■□□□□ 0.41
SHC1-201ENST00000366442 OR10C1Q96KK4 312 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 PRRT1Q99946 306 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 NAA60Q9H7X0 242 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 RETNQ9HD89 108 aa17.64■□□□□ 0.41
SHC1-201ENST00000366442 RSL24D1Q9UHA3 163 aaKnown RBP17.64■□□□□ 0.41
SHC1-201ENST00000366442 OR5AC1P0C628 307 aa17.63■□□□□ 0.41
SHC1-201ENST00000366442 SUB1P53999 127 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHC1-201ENST00000366442 AARDQ4LEZ3 155 aa17.63■□□□□ 0.41
SHC1-201ENST00000366442 GLYATL2Q8WU03 294 aa17.63■□□□□ 0.41
SHC1-201ENST00000366442 SMPXQ9UHP9 88 aa17.63■□□□□ 0.41
SHC1-201ENST00000366442 GPR132Q9UNW8 380 aa17.63■□□□□ 0.41
SHC1-201ENST00000366442 STARD9Q9P2P6 4700 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 IGHV3OR16-8A0A075B7F1 116 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 A0A0G2JRQ6 117 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 TEX13DA0A0J9YY54 714 aaPredicted RBP17.62■□□□□ 0.41
SHC1-201ENST00000366442 ANKRD20A5PA0PJZ0 165 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 CORTO00230 105 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 GNG7O60262 68 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 DHODHQ02127 395 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 RNASE11Q8TAA1 199 aaKnown RBP17.62■□□□□ 0.41
SHC1-201ENST00000366442 SOSTQ9BQB4 213 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 GGTLC1Q9BX51 225 aa17.62■□□□□ 0.41
SHC1-201ENST00000366442 LOC102724200A0A096LPH7 203 aaPredicted RBP17.61■□□□□ 0.41
SHC1-201ENST00000366442 ZNF207O43670 478 aaKnown RBP17.61■□□□□ 0.41
SHC1-201ENST00000366442 IGHV3-48P01763 117 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 ETV6P41212 452 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 NPBWR1P48145 328 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 HOXA1P49639 335 aaPredicted RBP17.61■□□□□ 0.41
SHC1-201ENST00000366442 DUSP18Q8NEJ0 188 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 OR51S1Q8NGJ8 323 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 OR52E5Q8NH55 327 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 RBPMSQ93062 196 aaKnown RBP17.61■□□□□ 0.41
SHC1-201ENST00000366442 ENY2Q9NPA8 101 aa17.61■□□□□ 0.41
SHC1-201ENST00000366442 SACSQ9NZJ4 4579 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 IGHV7-4-1A0A0J9YVY3 117 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 CRYM-AS1A6NIL9 109 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 YIF1AO95070 293 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 RNASE2P10153 161 aaKnown RBP17.6■□□□□ 0.41
SHC1-201ENST00000366442 TNFSF8P32971 234 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 Q6ZRM9 215 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 TMEM116Q8NCL8 245 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 LHFPL5Q8TAF8 219 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 FAM110AQ9BQ89 295 aa17.6■□□□□ 0.41
SHC1-201ENST00000366442 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.6■□□□□ 0.41
SHC1-201ENST00000366442 OR4C46A6NHA9 309 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 CHEK1O14757 476 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 SPCS3P61009 180 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 BSXQ3C1V8 233 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 SELENOHQ8IZQ5 122 aaKnown RBP17.59■□□□□ 0.41
SHC1-201ENST00000366442 MCFD2Q8NI22 146 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 RHPN1-AS1Q9BWJ2 59 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 SCP2D1Q9UJQ7 156 aa17.59■□□□□ 0.41
SHC1-201ENST00000366442 TRAV14DV4A0A0A6YYC5 116 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 FABP12A6NFH5 140 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 ZFAND6Q6FIF0 208 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 SCGB3A2Q96PL1 93 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 RNF2Q99496 336 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 GINS3Q9BRX5 216 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 TMEM56-RWDD3S4R434 201 aa17.58■□□□□ 0.4
SHC1-201ENST00000366442 ODF3L2Q3SX64 289 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms