RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SMCO3A2RU48 225 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 TEX22C9J3V5 150 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 I3L521 148 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
CCDC197-201ENST00000359253 CD5LO43866 347 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 M6PRP20645 277 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 RPL29P47914 159 aaKnown RBP10.75□□□□□ -0.69
CCDC197-201ENST00000359253 PMS2P11Q13670 270 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 LURAP1LQ8IV03 231 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 TEX29Q8N6K0 151 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 TMEM68Q96MH6 324 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 RPRMQ9NS64 109 aa10.75□□□□□ -0.69
CCDC197-201ENST00000359253 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
CCDC197-201ENST00000359253 ACANP16112 2415 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 NCBP2LA6PVI3 153 aaKnown RBP10.74□□□□□ -0.69
CCDC197-201ENST00000359253 LY6G6DO95868 133 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 HLA-DRB1P01911 266 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 FBP1P09467 338 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 GNB1P62873 340 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 AKR1C1Q04828 323 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 HNF4GQ14541 408 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 FXYD3Q14802 87 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 PEA15Q15121 130 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
CCDC197-201ENST00000359253 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 C22orf15Q8WYQ4 148 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 RASL11BQ9BPW5 248 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 ACTR3CQ9C0K3 210 aaPredicted RBP10.74□□□□□ -0.69
CCDC197-201ENST00000359253 FAM96BQ9Y3D0 163 aa10.74□□□□□ -0.69
CCDC197-201ENST00000359253 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
CCDC197-201ENST00000359253 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 CTXND1A0A1B0GTU2 59 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 FCN1O00602 326 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 CRYGCP07315 174 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 IGHV4-31P0DP07 118 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 ZP3P21754 424 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 TAGLN2P37802 199 aaKnown RBP10.73□□□□□ -0.69
CCDC197-201ENST00000359253 FFAR4Q5NUL3 377 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 SLC16A13Q7RTY0 426 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 C17orf50Q8WW18 174 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 PITPNC1Q9UKF7 332 aa10.73□□□□□ -0.69
CCDC197-201ENST00000359253 NPIPB5A8MRT5 1133 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 AGPAT2O15120 278 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 TGFAP01135 160 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 CTRB1P17538 263 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 FHITP49789 147 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 SELENOTP62341 195 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 SSBP2P81877 361 aaPredicted RBP10.72□□□□□ -0.69
CCDC197-201ENST00000359253 GAMTQ14353 236 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 CTRB2Q6GPI1 263 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 C16orf82Q7Z2V1 217 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 Q8N9W7 124 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 OR10G4Q8NGN3 311 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 ABHD5Q8WTS1 349 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 RBM14Q96PK6 669 aaKnown RBP10.72□□□□□ -0.69
CCDC197-201ENST00000359253 MGST2Q99735 147 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 GGTLC1Q9BX51 225 aa10.72□□□□□ -0.69
CCDC197-201ENST00000359253 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 M0QZK8 103 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 NDUFS6O75380 124 aaKnown RBP10.71□□□□□ -0.69
CCDC197-201ENST00000359253 CD5P06127 495 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 CD24P25063 80 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 PPT1P50897 306 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 CX3CL1P78423 397 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 KRTAP1-1Q07627 177 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 ACSM6Q6P461 480 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 SPSB3Q6PJ21 355 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 THAP8Q8NA92 274 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 THYN1Q9P016 225 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 SLC45A2Q9UMX9 530 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 PXMP4Q9Y6I8 212 aa10.71□□□□□ -0.69
CCDC197-201ENST00000359253 TMEM218A2RU14 115 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 IFNA1P01562 189 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 AREGP15514 252 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 HIST1H1BP16401 226 aaKnown RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 B2MP61769 119 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 PRR20EP86478 221 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 PRR20CP86479 221 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 PRR20DP86480 221 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 PRR20BP86481 221 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 PRR20AP86496 221 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 GUK1Q16774 197 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 RBMS3Q6XE24 437 aaKnown RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 RPP25LQ8N5L8 163 aaKnown RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 TMEM116Q8NCL8 245 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 RNF2Q99496 336 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms