RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 UTF1Q5T230 341 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 PDPNQ86YL7 162 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 PARD6GQ9BYG4 376 aaPredicted RBP9.17□□□□□ -0.94
SSU72-202ENST00000359060 SEBOXQ9HB31 216 aaPredicted RBP9.17□□□□□ -0.94
SSU72-202ENST00000359060 SOD3P08294 240 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 STAG3L2P0CL84 134 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 CBLN1P23435 193 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 CAMPP49913 170 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 CENPWQ5EE01 88 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 ARSJQ5FYB0 599 aaPredicted RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 OCC1Q8TAD7 63 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 TNFRSF19Q9NS68 423 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 FOXA2Q9Y261 457 aaPredicted RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 TRBV24-1A0A075B6N3 115 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 TMEM178BH3BS89 294 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 PROP1O75360 226 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 CEACAM4O75871 244 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 NUBP1P53384 320 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 TMEM30BQ3MIR4 351 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 C22orf34Q6ZV56 151 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 PCSK5Q92824 1860 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 PMCHP20382 165 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 VDAC2P45880 294 aaPredicted RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 TBR1Q16650 682 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 TCF23Q7RTU1 214 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 PRSS33Q8NF86 280 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 B9A039 149 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 RPL29P47914 159 aaKnown RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 KRTDAPP60985 99 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 GAMTQ14353 236 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 HLA-DRB5Q30154 266 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 KIAA1644Q3SXP7 199 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 SLC25A48Q6ZT89 311 aaKnown RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 MMD2Q8IY49 270 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 PNKDQ8N490 385 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
SSU72-202ENST00000359060 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
SSU72-202ENST00000359060 GATA4P43694 442 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 LHFPL4Q7Z7J7 247 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 SIGLECL1Q8N7X8 197 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 CHD8Q9HCK8 2581 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 WNT2P09544 360 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 TOMM20LQ6UXN7 152 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 ZNF705AQ6ZN79 300 aaPredicted RBP9.15□□□□□ -0.94
SSU72-202ENST00000359060 RNF2Q99496 336 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 FBXL15Q9H469 300 aa9.15□□□□□ -0.94
SSU72-202ENST00000359060 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.95
SSU72-202ENST00000359060 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.95
SSU72-202ENST00000359060 CD69Q07108 199 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 SSX8Q7RTT4 187 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 NUP37Q8NFH4 326 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 Q8TCH9 128 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
SSU72-202ENST00000359060 AMMECR1Q9Y4X0 333 aaPredicted RBP9.14□□□□□ -0.95
SSU72-202ENST00000359060 DYSFO75923 2080 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 A0A087X0M5 115 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 A0A1B0GX30 115 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 SRRM4A7MD48 611 aaKnown RBP9.14□□□□□ -0.95
SSU72-202ENST00000359060 LY6HO94772 140 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 TMPRSS3P57727 454 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 TMEM183AQ8IXX5 376 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 PERPQ96FX8 193 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
SSU72-202ENST00000359060 MGAQ8IWI9 3026 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 PPOXP50336 477 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 TPPP2P59282 170 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 IBA57Q5T440 356 aaKnown RBP9.14□□□□□ -0.95
SSU72-202ENST00000359060 CLEC7AQ9BXN2 247 aa9.14□□□□□ -0.95
SSU72-202ENST00000359060 PGPA6NDG6 321 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 ZNF253O75346 499 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 PYYP10082 97 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
SSU72-202ENST00000359060 CD24P25063 80 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 SELENOTP62341 195 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 IQCJQ1A5X6 159 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 HIST3H2BBQ8N257 126 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 ZNF596Q8TC21 504 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 E7EQL1 145 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 HYPMO75409 117 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 IGHV2-5P01817 119 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 LGALS7P47929 136 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 FAM209BQ5JX69 171 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 RASL11BQ9BPW5 248 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 FRYQ5TBA9 3013 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 DSPP15924 2871 aaKnown RBP9.13□□□□□ -0.95
SSU72-202ENST00000359060 FAM208BQ5VWN6 2430 aa9.13□□□□□ -0.95
SSU72-202ENST00000359060 H0YJW9 148 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms