RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HLA-DQA1P01909 254 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 C3orf79P0CE67 100 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 C8orf88P0DMB2 117 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 CD24P25063 80 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF134P52741 427 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 PEAR1Q5VY43 1037 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 DUX4L9Q6RFH8 374 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 C9orf106Q8NAJ2 232 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF596Q8TC21 504 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 RBM14Q96PK6 669 aaKnown RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 PRNDQ9UKY0 176 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 LAMTOR2Q9Y2Q5 125 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 PIEZO2Q9H5I5 2752 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 LNP1A1A4G5 178 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 PGPA6NDG6 321 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 C21orf140B9A014 251 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 WISP2O76076 250 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 MT-ND6P03923 174 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 GPX1P07203 203 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 LGALS4P56470 323 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 SRSF6Q13247 344 aaKnown RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 C10orf55Q5SWW7 151 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 SSX8Q7RTT4 187 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 SNRNP40Q96DI7 357 aaKnown RBP5.42□□□□□ -1.54
CSDE1-203ENST00000358528 KCNS1Q96KK3 526 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 PGLYRP4Q96LB8 373 aa5.42□□□□□ -1.54
CSDE1-203ENST00000358528 SERTM2A0A1B0GWG4 89 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF324O75467 553 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-203ENST00000358528 KIR2DS2P43631 304 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 BPIFB3P59826 476 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 TCF24Q7RTU0 167 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 PDPNQ86YL7 162 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 KIAA1549Q9HCM3 1950 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 DSPP15924 2871 aaKnown RBP5.41□□□□□ -1.54
CSDE1-203ENST00000358528 IGKV1D-17A0A075B6S4 117 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 IGHV2OR16-5A0A0B4J2B6 119 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 C15orf61A6NNL5 157 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 PDLIM4P50479 330 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 UTF1Q5T230 341 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 CENPVQ7Z7K6 275 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-203ENST00000358528 FDCSPQ8NFU4 85 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 SAP30LQ9HAJ7 183 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 CDC42EP3Q9UKI2 254 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 SH2D7A6NKC9 451 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-203ENST00000358528 IGKV1-16P04430 117 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 WNT2P09544 360 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 SUB1P53999 127 aaKnown RBP eCLIP5.41□□□□□ -1.547e-7■■■■□ 21.6
CSDE1-203ENST00000358528 CT45A1Q5HYN5 189 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 TPTE2P1Q5T6R2 138 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 LEMD1Q68G75 181 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 CT45A3Q8NHU0 189 aa5.41□□□□□ -1.54
CSDE1-203ENST00000358528 TMSB15BA0A087X1C1 80 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 A0A1W2PS18 150 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 AHRRA9YTQ3 701 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 TMEM144Q7Z5S9 345 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 RAB1CQ92928 201 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 A0A1W2PN81 502 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 NKX6-3A6NJ46 265 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 HIGD1CA8MV81 97 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 SLC25A17O43808 307 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 RBP4P02753 201 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 CCL3L1P16619 93 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 YPEL3P61236 119 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-203ENST00000358528 LYZP61626 148 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 TNXAQ16473 311 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 C11orf53Q8IXP5 236 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 C1orf174Q8IYL3 243 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 GCSAMQ8N6F7 178 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF738Q8NE65 137 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 Q8TCH9 128 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 FAM168AQ92567 244 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 DYNLRB1Q9NP97 96 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 NAV3Q8IVL0 2385 aa5.4□□□□□ -1.54
CSDE1-203ENST00000358528 KIR2DL5BA0A0G2JN68 375 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 KIR2DL5BA0A0G2JPC4 375 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 P01737 135 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 SAA1P0DJI8 122 aaPredicted RBP5.4□□□□□ -1.55
CSDE1-203ENST00000358528 ACP1P24666 158 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 HTR1DP28221 377 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 VDAC2P45880 294 aaPredicted RBP5.4□□□□□ -1.55
CSDE1-203ENST00000358528 SPRNQ5BIV9 151 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 KIR2DL5AQ8N109 375 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 STPG4Q8N801 248 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 OR1L8Q8NGR8 309 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 ADTRPQ96IZ2 230 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 ASCL2Q99929 193 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 GNB1LQ9BYB4 327 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 IFI27L2Q9H2X8 130 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 IDI2-AS1Q9NZ38 188 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 V9GYV3 84 aa5.4□□□□□ -1.55
CSDE1-203ENST00000358528 DYSFO75923 2080 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 IGHV1-18A0A0C4DH31 117 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 hADV38S2A0JD32 116 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 YPEL1O60688 119 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 COL8A1P27658 744 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 S100A7P31151 101 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 SP5Q6BEB4 398 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms