RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DMRTA1Q5VZB9 504 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 DDA1Q9BW61 102 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 PMCHL2Q9BQD1 86 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 LYNX1G3V0Z9 82 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 LYNX1P0DP58 116 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 NOVP48745 357 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 PEBP1P30086 187 aaKnown RBP14.61□□□□□ -0.07
COL27A1-201ENST00000356083 A0A1B0GUT8 65 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 FXYD1O00168 92 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 NANOS3P60323 173 aaKnown RBP14.6□□□□□ -0.07
COL27A1-201ENST00000356083 NEU4Q8WWR8 484 aaPredicted RBP14.6□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM222Q9H0R3 208 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 FNDC4Q9H6D8 234 aaPredicted RBP14.6□□□□□ -0.07
COL27A1-201ENST00000356083 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 TRAV14DV4A0A0A6YYC5 116 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 MTURNQ8N3F0 131 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 ZNF257Q9Y2Q1 563 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 PPP1R32Q7Z5V6 425 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 LINC01465Q8N7H1 131 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 ZIC4Q8N9L1 334 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 BRCA1P38398 1863 aaKnown RBP14.6□□□□□ -0.07
COL27A1-201ENST00000356083 C1QTNF12Q5T7M4 302 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 SLC25A45Q8N413 288 aa14.6□□□□□ -0.07
COL27A1-201ENST00000356083 PSMG4Q5JS54 123 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 ORAOV1Q8WV07 137 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 QSER1Q2KHR3 1735 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 IGFBP2P18065 325 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 PILRBQ9UKJ0 227 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 PAX1P15863 534 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 GATA2P23769 480 aaPredicted RBP14.59□□□□□ -0.07
COL27A1-201ENST00000356083 MRAPQ8TCY5 172 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 GREB1LQ9C091 1923 aaPredicted RBP14.59□□□□□ -0.07
COL27A1-201ENST00000356083 NAT1P18440 290 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 PEF1Q9UBV8 284 aaKnown RBP14.59□□□□□ -0.07
COL27A1-201ENST00000356083 CLPSL1A2RUU4 121 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 WDFY2Q96P53 400 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 DERL1Q9BUN8 251 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 PLNP26678 52 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 ELOVL5Q9NYP7 299 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 CYSLTR1Q9Y271 337 aa14.59□□□□□ -0.07
COL27A1-201ENST00000356083 TRGV1A0A0A0MS02 117 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 ZNF729A6NN14 1252 aaPredicted RBP14.58□□□□□ -0.08
COL27A1-201ENST00000356083 ZNF250P15622 560 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 TBR1Q16650 682 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 IMMP2LQ96T52 175 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 SCN10AQ9Y5Y9 1956 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 MS4A6AQ9H2W1 248 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 SCO2A0A1W2PP80 73 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 FOXS1O43638 330 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 Q9H3A6 140 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 NDUFS5O43920 106 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 GCHFRP30047 84 aa14.58□□□□□ -0.08
COL27A1-201ENST00000356083 ELF5Q9UKW6 265 aaPredicted RBP14.58□□□□□ -0.08
COL27A1-201ENST00000356083 MEGF9Q9H1U4 602 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 TRAV8-4A0A0B4J246 113 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 CD300LDQ6UXZ3 194 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 NPCDR1Q9BY65 106 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 HIGD1CA8MV81 97 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 MRPL32Q9BYC8 188 aaKnown RBP14.57□□□□□ -0.08
COL27A1-201ENST00000356083 UMODP07911 640 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 TMEM8BA6NDV4 472 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 JPT1Q9UK76 154 aa14.57□□□□□ -0.08
COL27A1-201ENST00000356083 M0R2P5 195 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 ORMDL3Q8N138 153 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 RREB1Q92766 1687 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 KIAA1549Q9HCM3 1950 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 NHP2Q9NX24 153 aaKnown RBP14.56□□□□□ -0.08
COL27A1-201ENST00000356083 ESDP10768 282 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 ZNF600Q6ZNG1 722 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 ACTL10Q5JWF8 245 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 TNRC6CQ9HCJ0 1690 aaKnown RBP14.56□□□□□ -0.08
COL27A1-201ENST00000356083 FRMPD3Q5JV73 1810 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 HS3ST3B1Q9Y662 390 aa14.56□□□□□ -0.08
COL27A1-201ENST00000356083 EGR4Q05215 589 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 TMEM174Q8WUU8 243 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 LIMS2Q7Z4I7 341 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 TIMM23BQ5SRD1 257 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 A0A1W2PPV9 198 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 CCL1P22362 96 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 RHOGP84095 191 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 C6orf226Q5I0X4 101 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 LCNL1Q6ZST4 164 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 ZNF114Q8NC26 417 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 OR52E5Q8NH55 327 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 ITGB1BP1O14713 200 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 PEX11BO96011 259 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 C9orf62Q8N4C0 152 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 HMGCLL1Q8TB92 370 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 RCHY1Q96PM5 261 aa14.55□□□□□ -0.08
COL27A1-201ENST00000356083 GNG5P63218 68 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 CFHR3Q02985 330 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 MSRB3Q8IXL7 192 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 TMEM126AQ9H061 195 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 KLHL30-AS1Q8NEE0 82 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 FAM57AQ8TBR7 257 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 FOXD3Q9UJU5 478 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-201ENST00000356083 GPX4P36969 197 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-201ENST00000356083 FAM216BQ8N7L0 139 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms