RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ANAPC10Q9UM13 185 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 CACNA1BQ00975 2339 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 KMT2BQ9UMN6 2715 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-203ENST00000354674 IGHV2-26A0A0B4J1V2 119 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 FAM231BA6NCW3 169 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 M0R1X1 148 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 STAG3L3P0CL85 134 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 GATA3P23771 443 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 CFHR2P36980 270 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 PLP1P60201 277 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 HERV-K104P61576 105 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 EFNB3Q15768 340 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 MORN2Q502X0 79 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 C3orf85A0A1B0GTC6 90 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 C11orf94C9JXX5 98 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 CDIPTO14735 213 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 CA2P00918 260 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 SRIP30626 198 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 MTURNQ8N3F0 131 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 MDFIC2A0A1B0GVS7 189 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 G3V4G9 280 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 H3BUT2 72 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 IGHV1-46P01743 117 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 ESDP10768 282 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 APOBEC3AP31941 199 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-203ENST00000354674 FXYD3Q14802 87 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 WDR82Q6UXN9 313 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 C19orf24Q9BVV8 132 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
SYNE1-203ENST00000354674 HIVEP3Q5T1R4 2406 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.31□□□□□ -1.08
SYNE1-203ENST00000354674 PPIAL4CA0A0B4J2A2 164 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 VSTM5A8MXK1 200 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 PLAUP00749 431 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 GRPP07492 148 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
SYNE1-203ENST00000354674 RHOGP84095 191 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 HTD2P86397 168 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-203ENST00000354674 GCSAMLQ5JQS6 135 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 TBC1D26Q86UD7 250 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 OR4S2Q8NH73 311 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 UBALD1Q8TB05 177 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 ZNF488Q96MN9 340 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 AP1S3Q96PC3 154 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 SPINK9Q5DT21 86 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 PRAMEF6Q5VXH4 476 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 FAM222BQ8WU58 562 aa8.31□□□□□ -1.08
SYNE1-203ENST00000354674 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
SYNE1-203ENST00000354674 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 PDCD6O75340 191 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 CNIH1O95406 144 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 ZNF146Q15072 292 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 SPRNQ5BIV9 151 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 OR2V2Q96R30 315 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 OR4C12Q96R67 309 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 IL36RNQ9UBH0 155 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 C7orf71A4D174 169 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 C17orf100A8MU93 164 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 LHBP01229 141 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 NPY1RP25929 384 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 SSTR5P35346 364 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 PAX9P55771 341 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 LRRC10Q5BKY1 277 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 BVES-AS1Q5T3Y7 98 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 PRAMEF5Q5TYX0 476 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 Q6P435 159 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 TMEM116Q8NCL8 245 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 Q8TCH9 128 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
SYNE1-203ENST00000354674 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
SYNE1-203ENST00000354674 CADP27708 2225 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 PPIAL4EA0A075B759 164 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 B9A039 149 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 SPRY3O43610 288 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 KRASP01116 189 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 TYMSP04818 313 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 PPIAL4FP0DN26 164 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 SP5Q6BEB4 398 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-203ENST00000354674 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
SYNE1-203ENST00000354674 ZNF826PQ6ZT77 177 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 MUC15Q8N387 334 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 OR10G4Q8NGN3 311 aa8.3□□□□□ -1.08
SYNE1-203ENST00000354674 TRAV38-1A0A0B4J264 116 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 K7EQM0 130 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 HS3ST1O14792 307 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 MPPED1O15442 326 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 SLC25A17O43808 307 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 CD24P25063 80 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 GPR6P46095 362 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-203ENST00000354674 GNB1P62873 340 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 ACSM6Q6P461 480 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 OR10P1Q8NGE3 313 aa8.29□□□□□ -1.08
SYNE1-203ENST00000354674 ITLN1Q8WWA0 313 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms