RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 OR8U8P0C7N1 319 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 DEFA4P12838 97 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 CXCL2P19875 107 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 KLK9Q2XQG4 91 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 OR8G2PQ6IF36 304 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 ETV3LQ6ZN32 361 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 MISP3Q96FF7 219 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 KLK15Q9H2R5 256 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 FNDC4Q9H6D8 234 aaPredicted RBP14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 KLK9Q9UKQ9 250 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 PSMB11A5LHX3 300 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 HMSDA8MTL9 139 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 OR2J3O76001 311 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 IGHV3-48P01763 117 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 IFNA4P05014 189 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 MDKP21741 143 aaPredicted RBP14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 EIF2B2P49770 351 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 SUB1P53999 127 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 RPP30P78346 268 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 WIPF2Q8TF74 440 aaPredicted RBP14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 AQP10Q96PS8 301 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 ZNF355PQ9NSJ1 428 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 HSPB11Q9Y547 144 aa14.82□□□□□ -0.04
CHMP4A-201ENST00000347519 TRBV9A0A0B4J1U6 114 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 IGHG4P01861 327 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 SULT1A1P50225 295 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 AP2S1P53680 142 aaPredicted RBP14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 RAB11AP62491 216 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 HIST2H2BDQ6DRA6 164 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 TMEM217Q8N7C4 229 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 PINX1Q96BK5 328 aaKnown RBP14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 SLC25A31Q9H0C2 315 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 MRPL36Q9P0J6 103 aaKnown RBP14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 DNHD1Q96M86 4753 aa14.81□□□□□ -0.04
CHMP4A-201ENST00000347519 I3L2K1 104 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 K7EIM0 57 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 ATP5IP56385 69 aaPredicted RBP14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 LGALSLQ3ZCW2 172 aaPredicted RBP14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 LAMTOR1Q6IAA8 161 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 ACOT7LQ6ZUV0 252 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 CENPVQ7Z7K6 275 aaPredicted RBP14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 OR4F5Q8NH21 305 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 HYLS1Q96M11 299 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 MFFQ9GZY8 342 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 WFDC1Q9HC57 220 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 S4R3C0 116 aa14.8□□□□□ -0.04
CHMP4A-201ENST00000347519 MT-CO2P00403 227 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 TRGV3P03979 118 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 PF4V1P10720 104 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 PSMB8P28062 276 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 RHOGP84095 191 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 INO80EQ8NBZ0 244 aaPredicted RBP14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 RNASEH2CQ8TDP1 164 aaKnown RBP14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 SMIM3Q9BZL3 60 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 FBXL7Q9UJT9 491 aa14.79□□□□□ -0.04
CHMP4A-201ENST00000347519 CLPSL1A2RUU4 121 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 MFSD2BA6NFX1 497 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 BRI3O95415 125 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 PROK1P58294 105 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 SLC35B1P78383 322 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 CD69Q07108 199 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 SLC38A11Q08AI6 406 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 KRTAP24-1Q3LI83 254 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 TCTEX1D4Q5JR98 221 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 STX12Q86Y82 276 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 C9orf62Q8N4C0 152 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 OR1L6Q8NGR2 347 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 GON7Q9BXV9 100 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 ZC4H2Q9NQZ6 224 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 RNF114Q9Y508 228 aa14.78□□□□□ -0.04
CHMP4A-201ENST00000347519 H3BUA1 57 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 HAX1O00165 279 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 IGHV3-23P01764 117 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 RPLP1P05386 114 aaKnown RBP14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 HIST1H1BP16401 226 aaKnown RBP14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 NUP62P37198 522 aaPredicted RBP14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 OPRK1P41145 380 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 RAB9AP51151 201 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 TPPP2P59282 170 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 BAXQ07812 192 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 KCNRGQ8N5I3 272 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 OR5AU1Q8NGC0 362 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 OR10P1Q8NGE3 313 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 OR5C1Q8NGR4 320 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 FBXL17Q9UF56 701 aa14.77□□□□□ -0.04
CHMP4A-201ENST00000347519 KRTAP10-3P60369 221 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 FOXE3Q13461 319 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 CLINT1Q14677 625 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 TEX38Q6PEX7 206 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 SLC16A13Q7RTY0 426 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 NECAP1Q8NC96 275 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 SCARB1Q8WTV0 552 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 MDFIQ99750 246 aa14.76□□□□□ -0.05
CHMP4A-201ENST00000347519 TMEM89A2RUT3 159 aa14.75□□□□□ -0.05
CHMP4A-201ENST00000347519 CORTO00230 105 aa14.75□□□□□ -0.05
CHMP4A-201ENST00000347519 HNRNPCP07910 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP4A-201ENST00000347519 GPX4P36969 197 aaPredicted RBP14.75□□□□□ -0.05
CHMP4A-201ENST00000347519 OR2F1Q13607 317 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms