RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 BSCL2Q96G97 398 aaPredicted RBP10.84□□□□□ -0.67
HMGN3-202ENST00000344726 NEURL2Q9BR09 285 aa10.84□□□□□ -0.67
HMGN3-202ENST00000344726 ZMAT4Q9H898 229 aa10.84□□□□□ -0.67
HMGN3-202ENST00000344726 GPR132Q9UNW8 380 aa10.84□□□□□ -0.67
HMGN3-202ENST00000344726 C3orf84H3BNL1 204 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-202ENST00000344726 ZNF57Q68EA5 555 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-202ENST00000344726 LINC00322Q6ZN03 302 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-202ENST00000344726 Q6ZRM9 215 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 UBAC2Q8NBM4 344 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
HMGN3-202ENST00000344726 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 RSL24D1Q9UHA3 163 aaKnown RBP10.83□□□□□ -0.68
HMGN3-202ENST00000344726 LYSTQ99698 3801 aa10.83□□□□□ -0.68
HMGN3-202ENST00000344726 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 FABP12A6NFH5 140 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 CDS2O95674 445 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 MT-CO2P00403 227 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 CTSGP08311 255 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
HMGN3-202ENST00000344726 Q56UQ5 140 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 TMEM230Q96A57 120 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 CITED4Q96RK1 184 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 NAA60Q9H7X0 242 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 RETNQ9HD89 108 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 SLC2A8Q9NY64 477 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
HMGN3-202ENST00000344726 C14orf166Q9Y224 244 aaKnown RBP10.82□□□□□ -0.68
HMGN3-202ENST00000344726 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
HMGN3-202ENST00000344726 DNAH1Q9P2D7 4330 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 TEX13DA0A0J9YY54 714 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-202ENST00000344726 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 NDUFA4O00483 81 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 B3GALNT1O75752 331 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
HMGN3-202ENST00000344726 ETV6P41212 452 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
HMGN3-202ENST00000344726 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
HMGN3-202ENST00000344726 MARC2Q969Z3 335 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 PRRT1Q99946 306 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 V9GYH0 126 aa10.81□□□□□ -0.68
HMGN3-202ENST00000344726 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 CCDC160A6NGH7 325 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 OR11H12B2RN74 326 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 ATG12O94817 140 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 IFNA17P01571 189 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 TRIM63Q969Q1 353 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 PINX1Q96BK5 328 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 RRNAD1Q96FB5 475 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
HMGN3-202ENST00000344726 PRR13Q9NZ81 148 aa10.8□□□□□ -0.68
HMGN3-202ENST00000344726 MFAP4P55083 255 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 KLF9Q13886 244 aaPredicted RBP10.79□□□□□ -0.68
HMGN3-202ENST00000344726 ZNF79Q15937 498 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
HMGN3-202ENST00000344726 RBPMSQ93062 196 aaKnown RBP10.79□□□□□ -0.68
HMGN3-202ENST00000344726 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 SPATA25Q9BR10 227 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 MCUBQ9NWR8 336 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
HMGN3-202ENST00000344726 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
HMGN3-202ENST00000344726 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 SNCAP37840 140 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 HOXA1P49639 335 aaPredicted RBP10.78□□□□□ -0.68
HMGN3-202ENST00000344726 DHODHQ02127 395 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 TMEM187Q14656 261 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 TMEM268Q5VZI3 342 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 TXN2Q99757 166 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 MRPL36Q9P0J6 103 aaKnown RBP10.78□□□□□ -0.68
HMGN3-202ENST00000344726 SCP2D1Q9UJQ7 156 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
HMGN3-202ENST00000344726 C15orf62A8K5M9 175 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 K7EMT4 169 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms