RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ADMP35318 185 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 SNCAP37840 140 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 RND3P61587 244 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 PRCDQ00LT1 54 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 SP6Q3SY56 376 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 CCDC71LQ8N9Z2 235 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 ZFAND1Q8TCF1 268 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 C15orf40Q8WUR7 153 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
SGCA-202ENST00000344627 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 ABHD1Q96SE0 405 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
SGCA-202ENST00000344627 PDCD10Q9BUL8 212 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 ENY2Q9NPA8 101 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 MTFP1Q9UDX5 166 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 C3orf85A0A1B0GTC6 90 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 OR4C46A6NHA9 309 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
SGCA-202ENST00000344627 K7EMT4 169 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 TSPAN4O14817 238 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 GNG7O60262 68 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 CTSDP07339 412 aaPredicted RBP9.25□□□□□ -0.93
SGCA-202ENST00000344627 CTSGP08311 255 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 TBPP20226 339 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 TFPI2P48307 235 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
SGCA-202ENST00000344627 TAS2R19P59542 299 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 STEAP1BQ6NZ63 245 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 ARRDC1Q8N5I2 433 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 TMEM229BQ8NBD8 167 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 OR4D10Q8NGI6 311 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 KIR2DL5BQ8NHK3 375 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 TERB2Q8NHR7 220 aa9.25□□□□□ -0.93
SGCA-202ENST00000344627 RRNAD1Q96FB5 475 aaKnown RBP9.25□□□□□ -0.93
SGCA-202ENST00000344627 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
SGCA-202ENST00000344627 C15orf62A8K5M9 175 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 I3L2K1 104 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 ST8SIA3O43173 380 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 IGKV1-5P01602 117 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
SGCA-202ENST00000344627 HOXA1P49639 335 aaPredicted RBP9.24□□□□□ -0.93
SGCA-202ENST00000344627 TNFRSF9Q07011 255 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 LHFPL1Q86WI0 220 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 OR13C8Q8NGS7 320 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 MARCH1Q8TCQ1 289 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 TXN2Q99757 166 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 OVOL2Q9BRP0 275 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
SGCA-202ENST00000344627 C14orf166Q9Y224 244 aaKnown RBP9.24□□□□□ -0.93
SGCA-202ENST00000344627 KLK5Q9Y337 293 aaPredicted RBP9.24□□□□□ -0.93
SGCA-202ENST00000344627 IGHV3OR16-13A0A075B7E8 117 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 TRAV14DV4A0A0A6YYC5 116 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 IGHV3-74A0A0B4J1X5 117 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 A0A0B4J293 547 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 TEX13DA0A0J9YY54 714 aaPredicted RBP9.23□□□□□ -0.93
SGCA-202ENST00000344627 H3BMQ9 156 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 GABARAPH6UMI1 98 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 CTDSP2O14595 271 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 ETV6P41212 452 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 NPBWR1P48145 328 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 SUB1P53999 127 aaKnown RBP eCLIP9.23□□□□□ -0.93
SGCA-202ENST00000344627 IL18Q14116 193 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 SPCS2Q15005 226 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 FAAP20Q6NZ36 180 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 RNF2Q99496 336 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 RHPN1-AS1Q9BWJ2 59 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 C6orf62Q9GZU0 229 aaPredicted RBP9.23□□□□□ -0.93
SGCA-202ENST00000344627 NXF2Q9GZY0 626 aaKnown RBP9.23□□□□□ -0.93
SGCA-202ENST00000344627 RBM38Q9H0Z9 239 aaKnown RBP9.23□□□□□ -0.93
SGCA-202ENST00000344627 MIXL1Q9H2W2 232 aa9.23□□□□□ -0.93
SGCA-202ENST00000344627 ALMS1Q8TCU4 4167 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 A6NHS1 94 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 DISC1C4P0D8 188 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 CHEK1O14757 476 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 RPL11P62913 178 aaKnown RBP9.22□□□□□ -0.93
SGCA-202ENST00000344627 MRPS10P82664 201 aaKnown RBP9.22□□□□□ -0.93
SGCA-202ENST00000344627 MEF2DQ14814 521 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 GBGT1Q8N5D6 347 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 DIRAS2Q96HU8 199 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 GINS3Q9BRX5 216 aa9.22□□□□□ -0.93
SGCA-202ENST00000344627 IGHV3-66A0A0C4DH42 116 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 SPRY2O43597 315 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 CD74P04233 296 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 CD5P06127 495 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 FCGR2BP31994 310 aaPredicted RBP9.21□□□□□ -0.94
SGCA-202ENST00000344627 PAFAH1B2P68402 229 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 PMS2P11Q13670 270 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 DEFB135Q30KP9 77 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 ODF3L2Q3SX64 289 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 APRG1Q8IVJ8 170 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms