RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 HIGD1AQ9Y241 93 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 CELA3BP08861 270 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 MEGF9Q9H1U4 602 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 PRDM6Q9NQX0 595 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 CACNA1HO95180 2353 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 SP9P0CG40 484 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
RPL28-201ENST00000344063 TMEM116Q8NCL8 245 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 UBTD1Q9HAC8 227 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 DOPEY2Q9Y3R5 2298 aa9.1□□□□□ -0.95
RPL28-201ENST00000344063 RBFOX2O43251 390 aaKnown RBP eCLIP9.09□□□□□ -0.95
RPL28-201ENST00000344063 B3GALT5-AS1P59052 145 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 RAB1BQ9H0U4 201 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 TNFRSF19Q9NS68 423 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 WDR83OSQ9Y284 106 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 INTS1Q8N201 2190 aaKnown RBP9.09□□□□□ -0.95
RPL28-201ENST00000344063 IGHV3-72A0A0B4J1Y9 119 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 MUC21A0A0G2JKD1 596 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 MUC21A0A140T8X8 626 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 H3BUT2 72 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 CA7P43166 264 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 TIMM23BQ5SRD1 257 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 EAF1Q96JC9 268 aaPredicted RBP9.09□□□□□ -0.95
RPL28-201ENST00000344063 GUCD1Q96NT3 240 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 ELOVL5Q9NYP7 299 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 ZNF407Q9C0G0 2248 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 TICRRQ7Z2Z1 1910 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
RPL28-201ENST00000344063 PKDREJQ9NTG1 2253 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 C9orf172C9J069 976 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 YPEL1O60688 119 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 IGKV1-5P01602 117 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 ORM1P02763 201 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 REG1AP05451 166 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 Q6ZVH6 145 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 SCNM1Q9BWG6 230 aa9.09□□□□□ -0.95
RPL28-201ENST00000344063 ZNF256Q9Y2P7 627 aaPredicted RBP9.09□□□□□ -0.95
RPL28-201ENST00000344063 SRSF9Q13242 221 aaKnown RBP eCLIP9.08□□□□□ -0.96
RPL28-201ENST00000344063 OSR1Q8TAX0 266 aaPredicted RBP9.08□□□□□ -0.96
RPL28-201ENST00000344063 CDC42EP3Q9UKI2 254 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 TRAV9-2A0A087WT02 112 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 IGHV2OR16-5A0A0B4J2B6 119 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
RPL28-201ENST00000344063 C3orf79P0CE67 100 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 FDCSPQ8NFU4 85 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 SRSF12Q8WXF0 261 aaKnown RBP9.08□□□□□ -0.96
RPL28-201ENST00000344063 TMEM186Q96B77 213 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
RPL28-201ENST00000344063 FAM157AC9JC47 383 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 LILRA1O75019 489 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 SPATA31B1PQ5VZV4 182 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 COL4A3Q01955 1670 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 DOCK10Q96BY6 2186 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 J3KRW8 73 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 LINC00205P59089 165 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 KHDC1LQ5JSQ8 128 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
RPL28-201ENST00000344063 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 SLC25A17O43808 307 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 MPV17L2Q567V2 206 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 WDR82Q6UXN9 313 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 KBTBD11-OT1A0A1B0GTJ5 212 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 HIGD1CA8MV81 97 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 TM4SF5O14894 197 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 CD40P25942 277 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 NPIPB3Q92617 1050 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 IFI27L2Q9H2X8 130 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 C1RLQ9NZP8 487 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
RPL28-201ENST00000344063 IL15RAQ13261 267 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 OR9G1Q8NH87 305 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 NPIPB11E5RHQ5 1161 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 MOSP00540 346 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 LGALS7P47929 136 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 HBBP68871 147 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 RNASEH2CQ8TDP1 164 aaKnown RBP9.07□□□□□ -0.96
RPL28-201ENST00000344063 HS3ST6Q96QI5 342 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 AP5S1Q9NUS5 200 aa9.07□□□□□ -0.96
RPL28-201ENST00000344063 PSG1P11464 419 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 UBE2V1Q13404 147 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 KIAA1671Q9BY89 1806 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 DUTP33316 252 aaKnown RBP9.06□□□□□ -0.96
RPL28-201ENST00000344063 EMP1P54849 157 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 TBR1Q16650 682 aa9.06□□□□□ -0.96
RPL28-201ENST00000344063 MORN2Q502X0 79 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms