RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TAS2R45P59539 299 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 FXYD3Q14802 87 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 MRPL21Q7Z2W9 205 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 DRAM1Q8N682 238 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 TPRX1Q8N7U7 411 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 IL1F10Q8WWZ1 152 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 PATE1Q8WXA2 126 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 ADTRPQ96IZ2 230 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 POM121L2Q96KW2 1035 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 C19orf24Q9BVV8 132 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 THYN1Q9P016 225 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 TEX48A0A1B0GUV7 120 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 F8W1H4 67 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 DEFA4P12838 97 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 CEBPDP49716 269 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 SLC35B1P78383 322 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 EFNB3Q15768 340 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 LTC4SQ16873 150 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 SPATA46Q5T0L3 261 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 LYSMD4Q5XG99 296 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 SLC35E4Q6ICL7 350 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 ZNF841Q6ZN19 808 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 OR4A5Q8NH83 315 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 RPP25Q9BUL9 199 aaKnown RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 PRDM14Q9GZV8 571 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 DUSP13Q9UII6 198 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 TSSC4Q9Y5U2 329 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-201ENST00000343524 SHANK1Q9Y566 2161 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 CFAP46Q8IYW2 2715 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 WDFY3Q8IZQ1 3526 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 EXPH5Q8NEV8 1989 aa6.73□□□□□ -1.33
ATG4A-201ENST00000343524 KALRNO60229 2985 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 FNDC10F2Z333 226 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 RRHO14718 337 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 EFNA2O43921 213 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 ZIC3O60481 467 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 WISP2O76076 250 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 G6PCP35575 357 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 RPL8P62917 257 aaKnown RBP6.72□□□□□ -1.33
ATG4A-201ENST00000343524 HBBP68871 147 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 AESQ08117 197 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 CEACAM21Q3KPI0 293 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 CT55Q8WUE5 264 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 MBD6Q96DN6 1003 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 IGF2BP2-AS1Q96M15 143 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 MGST2Q99735 147 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 METTL7AQ9H8H3 244 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 OR1A1Q9P1Q5 309 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 LOXL2Q9Y4K0 774 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 ALPK2Q86TB3 2170 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 A1L4Q6 167 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 OTOL1A6NHN0 477 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-201ENST00000343524 LILRA5A6NI73 299 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 H0Y8G0 127 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 HSPB6O14558 160 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 CYC1P08574 325 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-201ENST00000343524 GPR12P47775 334 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 RUNX3Q13761 415 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 MIC13Q5XKP0 118 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 CCDC144NLQ6NUI1 221 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 TSTD1Q8NFU3 115 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 BOKQ9UMX3 212 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-201ENST00000343524 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
ATG4A-201ENST00000343524 NOTCH4Q99466 2003 aa6.71□□□□□ -1.33
ATG4A-201ENST00000343524 MYO9AB2RTY4 2548 aa6.71□□□□□ -1.33
ATG4A-201ENST00000343524 ARID1BQ8NFD5 2236 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1B0GXF2 115 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 H0Y8X5 98 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 DNPH1O43598 174 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 TSPAN13O95857 204 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 P04436 131 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 CXCL12P48061 93 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 CYB561P49447 251 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 WIPI1Q5MNZ9 446 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-201ENST00000343524 SAMD5Q5TGI4 173 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-201ENST00000343524 PERPQ96FX8 193 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 C1QTNF5Q9BXJ0 243 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 DOCK11Q5JSL3 2073 aa6.71□□□□□ -1.34
ATG4A-201ENST00000343524 TNFRSF4P43489 277 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 CSN1S1P47710 185 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 UQCRFS1P47985 274 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 404.1 ms