RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KIAA1549Q9HCM3 1950 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 PLGLB1Q02325 96 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 C5orf64Q2M2E5 130 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 ADTRPQ96IZ2 230 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 SRXN1Q9BYN0 137 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 PCDH15Q96QU1 1955 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 SERTM2A0A1B0GWG4 89 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 FAM87AP0C7U9 286 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 PRAMEF5Q5TYX0 476 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 PRAMEF6Q5VXH4 476 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 OR2Z1Q8NG97 314 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 RABAC1Q9UI14 185 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 TSSC4Q9Y5U2 329 aaPredicted RBP15.22■□□□□ 0.03
SMPD1-201ENST00000342245 TMEM30CPA0ZSE6 113 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 SS18L1O75177 396 aaPredicted RBP15.22■□□□□ 0.03
SMPD1-201ENST00000342245 FGF6P10767 208 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 LIFP15018 202 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 DUTP33316 252 aaKnown RBP15.22■□□□□ 0.03
SMPD1-201ENST00000342245 MRPS21P82921 87 aaKnown RBP15.22■□□□□ 0.03
SMPD1-201ENST00000342245 CCDC144NLQ6NUI1 221 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 TEX45Q8NA69 505 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 DEFB126Q9BYW3 111 aa15.22■□□□□ 0.03
SMPD1-201ENST00000342245 A1L4Q6 167 aa15.21■□□□□ 0.03
SMPD1-201ENST00000342245 OOEPA6NGQ2 149 aa15.21■□□□□ 0.03
SMPD1-201ENST00000342245 UBALD1Q8TB05 177 aa15.21■□□□□ 0.03
SMPD1-201ENST00000342245 NABP2Q9BQ15 211 aa15.21■□□□□ 0.03
SMPD1-201ENST00000342245 ZNF716A6NP11 495 aa15.21■□□□□ 0.02
SMPD1-201ENST00000342245 BOD1L2Q8IYS8 172 aa15.21■□□□□ 0.02
SMPD1-201ENST00000342245 NGFP01138 241 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 ERVK-16P61578 105 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 MEF2CQ06413 473 aaPredicted RBP15.2■□□□□ 0.02
SMPD1-201ENST00000342245 C2CD4DB7Z1M9 353 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 GPR12P47775 334 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 SPEM1Q8N4L4 309 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 TSTD1Q8NFU3 115 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 POLDIP2Q9Y2S7 368 aa15.2■□□□□ 0.02
SMPD1-201ENST00000342245 ACTL6BO94805 426 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 ADH4P08319 380 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 CT83Q5H943 113 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 SAMD5Q5TGI4 173 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 MRPL32Q9BYC8 188 aaKnown RBP15.19■□□□□ 0.02
SMPD1-201ENST00000342245 FGF21Q9NSA1 209 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 SIGLEC8Q9NYZ4 499 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 K7EQM0 130 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 CCNOP22674 350 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 ZNF146Q15072 292 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 TRAT1Q6PIZ9 186 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 ZNF788Q6ZQV5 615 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 RPS19BP1Q86WX3 136 aaKnown RBP15.19■□□□□ 0.02
SMPD1-201ENST00000342245 ZNF503Q96F45 646 aa15.19■□□□□ 0.02
SMPD1-201ENST00000342245 SEC16AO15027 2179 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 F8W1H4 67 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 AGFG2O95081 481 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 C8orf88P0DMB2 117 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 ZXDAP98168 799 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 ABHD12Q8N2K0 398 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 LINC00470Q9BZP3 86 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 TEX50A0A1B0GTY4 177 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 C5orf49A4QMS7 147 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 LINC00473A8K010 186 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 C12orf77C9JDV5 145 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 SMAD7O15105 426 aaKnown RBP15.18■□□□□ 0.02
SMPD1-201ENST00000342245 SMIM13P0DJ93 91 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 OCIAD1Q9NX40 245 aa15.18■□□□□ 0.02
SMPD1-201ENST00000342245 A8MWL6 223 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 DUX1O43812 170 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 IGFBP2P18065 325 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 AESQ08117 197 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 GUSBP1Q15486 140 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 GEMIN7Q9H840 131 aaKnown RBP15.17■□□□□ 0.02
SMPD1-201ENST00000342245 AMMECR1Q9Y4X0 333 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-201ENST00000342245 CYC1P08574 325 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 CSN1S1P47710 185 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 FOXA3P55318 350 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-201ENST00000342245 FOXE3Q13461 319 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 OR1C1Q15619 314 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 Q6ZS52 159 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 GFRA4Q9GZZ7 299 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 FER1L5A0AVI2 2057 aa15.17■□□□□ 0.02
SMPD1-201ENST00000342245 GON4LQ3T8J9 2241 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 ERVK11-1P61568 191 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 ADAMTSL5Q6ZMM2 481 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 RTL8AQ9BWD3 113 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 TCF19Q9Y242 345 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 NCKAP5O14513 1909 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 A0A1W2PPC4 97 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 CT45A6P0DMU7 189 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 CT45A5P0DMU8 189 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 CT45A7P0DMV0 189 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 CT45A1Q5HYN5 189 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 CT45A3Q8NHU0 189 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 VGLL1Q99990 258 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 NAA38Q9BRA0 125 aaKnown RBP15.16■□□□□ 0.02
SMPD1-201ENST00000342245 ENY2Q9NPA8 101 aa15.16■□□□□ 0.02
SMPD1-201ENST00000342245 IGHV1OR21-1A0A087WYE8 117 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 SP1P08047 785 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms