RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-201ENST00000340074 OR9G4Q8NGQ1 327 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 SCARB1Q8WTV0 552 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 AURKAIP1Q9NWT8 199 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-201ENST00000340074 OR2C1O95371 312 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 TCRBP04435 133 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 LYG2Q86SG7 212 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
UBE3B-201ENST00000340074 ELOVL1Q9BW60 279 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 C21orf62Q9NYP8 219 aa11.65□□□□□ -0.54
UBE3B-201ENST00000340074 TRAV6A0A075B6T7 132 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 A0A1B0GU03 582 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 I3L2K1 104 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 HOXB5P09067 269 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
UBE3B-201ENST00000340074 SUB1P53999 127 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE3B-201ENST00000340074 IFITM3Q01628 133 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 ASAH1Q13510 395 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 OR4C12Q96R67 309 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
UBE3B-201ENST00000340074 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 F8W735 103 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-201ENST00000340074 TGOLN2O43493 480 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 MT-CO2P00403 227 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 C11orf87Q6NUJ2 197 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 PLET1Q6UQ28 207 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 IL34Q6ZMJ4 242 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 UBAC2Q8NBM4 344 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 OR52B4Q8NGK2 314 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-201ENST00000340074 NUDT15Q9NV35 164 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
UBE3B-201ENST00000340074 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
UBE3B-201ENST00000340074 FAM240BA0A1B0GVZ2 78 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 PITX3O75364 302 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 HTR2BP41595 481 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 Q56UQ5 140 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 PVRIGQ6DKI7 326 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 COQ8AQ8NI60 647 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 BSCL2Q96G97 398 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-201ENST00000340074 RBKSQ9H477 322 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
UBE3B-201ENST00000340074 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
UBE3B-201ENST00000340074 IGHV3-35A0A0C4DH35 117 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 WI2-2373I1.2A0A1W2PRP0 233 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 LGALS9O00182 355 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 CORTO00230 105 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 ADAP1O75689 374 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 CSN3P07498 182 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 SLC25A6P12236 298 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 HAPLN4Q86UW8 402 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 ATP6V0BQ99437 205 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 HIPK2Q9H2X6 1198 aa11.61□□□□□ -0.55
UBE3B-201ENST00000340074 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 H2AFB2P0C5Z0 115 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 MFAP4P55083 255 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 FAM106AQ4KMX7 169 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 DTD1Q8TEA8 209 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 CHRDL1Q9BU40 450 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 K7EIL1 84 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 IGLV1-51P01701 117 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 EDN2P20800 178 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-201ENST00000340074 ADMP35318 185 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 OPRK1P41145 380 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 MLANAQ16655 118 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 SPSB3Q6PJ21 355 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 ADAMTSL5Q6ZMM2 481 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 MRAPQ8TCY5 172 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 MITD1Q8WV92 249 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 TMEM170AQ8WVE7 144 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 PRR25Q96S07 402 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 TXN2Q99757 166 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
UBE3B-201ENST00000340074 ZNF256Q9Y2P7 627 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-201ENST00000340074 CTSGP08311 255 aa11.59□□□□□ -0.55
UBE3B-201ENST00000340074 SPNP16150 400 aa11.59□□□□□ -0.55
UBE3B-201ENST00000340074 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
UBE3B-201ENST00000340074 SEC22CQ9BRL7 303 aa11.59□□□□□ -0.55
UBE3B-201ENST00000340074 ZNF436Q9C0F3 470 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-201ENST00000340074 FNDC4Q9H6D8 234 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-201ENST00000340074 GAR1Q9NY12 217 aaKnown RBP11.59□□□□□ -0.55
UBE3B-201ENST00000340074 C2orf70A6NJV1 201 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 A8MWP6 167 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms