RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 ZNF525Q8N782 197 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 OCC1Q8TAD7 63 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 CDK2AP2O75956 126 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 NBEAP1P0C6P0 100 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 ANOS1P23352 680 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 MST1P26927 711 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 HEPN1Q6WQI6 88 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 ZNF414Q96IQ9 312 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 LINC00470Q9BZP3 86 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 CRIM1Q9NZV1 1036 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 C9JQL5 133 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 TSPAN13O95857 204 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 UCP1P25874 307 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 LY6EQ16553 131 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 ZGRF1Q86YA3 2104 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 SMRP1Q8NCR6 262 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 EDA2RQ9HAV5 297 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 TMEM106BQ9NUM4 274 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 B4E171 279 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 ADCYAP1P18509 176 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 FOXG1P55316 489 aaPredicted RBP7.33□□□□□ -1.24
RTN3-202ENST00000339997 ZNF658BQ4V348 819 aaPredicted RBP7.33□□□□□ -1.24
RTN3-202ENST00000339997 C1orf185Q5T7R7 199 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 ZNF324BQ6AW86 544 aaPredicted RBP7.33□□□□□ -1.24
RTN3-202ENST00000339997 OR4C13Q8NGP0 309 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 TMEM171Q8WVE6 324 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 TUBA4BQ9H853 241 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 CLDN16Q9Y5I7 305 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 BOD1L1Q8NFC6 3051 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 F8P00451 2351 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 SS18L1O75177 396 aaPredicted RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 HBBP68871 147 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 CX3CL1P78423 397 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 JKAMPQ9P055 326 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 DLL1O00548 723 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 GPX4P36969 197 aaPredicted RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 SUPT4H1P63272 117 aaKnown RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 SIGLEC12Q96PQ1 595 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 FBXL15Q9H469 300 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 IL36BQ9NZH7 164 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 IGKV3D-20A0A0C4DH25 116 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 LNP1A1A4G5 178 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 TMEM210A6NLX4 147 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 UBE2CO00762 179 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 GZMBP10144 247 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 HIST3H2BBQ8N257 126 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 PLPPR1Q8TBJ4 325 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 MRPL16Q9NX20 251 aaKnown RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 NDUFA3O95167 84 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 SELENOTP62341 195 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 ASCL2Q99929 193 aa7.32□□□□□ -1.24
RTN3-202ENST00000339997 NHP2Q9NX24 153 aaKnown RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 PEF1Q9UBV8 284 aaKnown RBP7.32□□□□□ -1.24
RTN3-202ENST00000339997 FRYQ5TBA9 3013 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 hCG_38984A0A1B0GV85 526 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 DLX6P56179 175 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 SORL1Q92673 2214 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
RTN3-202ENST00000339997 WDR82Q6UXN9 313 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 LYZL4Q96KX0 146 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 F8VVB4 439 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 F8VWA3 439 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 FGF16O43320 207 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 ZNF138P52744 262 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 CYTL1Q9NRR1 136 aa7.31□□□□□ -1.24
RTN3-202ENST00000339997 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 OR11H12B2RN74 326 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 CDX4O14627 284 aaPredicted RBP7.3□□□□□ -1.24
RTN3-202ENST00000339997 SLC25A20O43772 301 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 IGFBP3P17936 291 aaPredicted RBP7.3□□□□□ -1.24
RTN3-202ENST00000339997 TBR1Q16650 682 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 LINC00596Q86U02 117 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 OR11H1Q8NG94 326 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 OR11H2Q8NH07 326 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 FOXA2Q9Y261 457 aaPredicted RBP7.3□□□□□ -1.24
RTN3-202ENST00000339997 IGKV1-12A0A0C4DH73 117 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 IGKV1D-12P01611 117 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 CCL3L1P16619 93 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 PCOLCEQ15113 449 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 RAX2Q96IS3 184 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 SFTPCP11686 197 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 COX6A1P12074 109 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 PSG7Q13046 419 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 PNKDQ8N490 385 aa7.3□□□□□ -1.24
RTN3-202ENST00000339997 NXT2Q9NPJ8 142 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms