RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 IGLV3-27P01718 113 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 TMEM196Q5HYL7 178 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 ITLN1Q8WWA0 313 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 LHX9Q9NQ69 397 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 KCNE1BA0A087WTH5 132 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 PSG1P11464 419 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 IFITM3Q01628 133 aa10.92□□□□□ -0.66
USP47-202ENST00000339865 TMEM240Q5SV17 173 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 CD5LO43866 347 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 STHQ8IWL8 128 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 ZNF385AQ96PM9 386 aaKnown RBP10.91□□□□□ -0.66
USP47-202ENST00000339865 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 Q9H3A6 140 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 FAM60AQ9NP50 221 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 F8WEM9 126 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 ZP1P60852 638 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 Q5BKY6 102 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 Q6AWC8 147 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 CEACAM8P31997 349 aaPredicted RBP10.91□□□□□ -0.66
USP47-202ENST00000339865 ATP5G3P48201 142 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 PCOLCEQ15113 449 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 TMEM174Q8WUU8 243 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 TRACP01848 142 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 PPIAL4GP0DN37 164 aa10.91□□□□□ -0.66
USP47-202ENST00000339865 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
USP47-202ENST00000339865 IGFBP2P18065 325 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 PSG3Q16557 428 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 BCL6BQ8N143 479 aaPredicted RBP10.9□□□□□ -0.66
USP47-202ENST00000339865 RFLNBQ8N5W9 214 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 SVIPQ8NHG7 77 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 METRNQ9UJH8 293 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 SSC5DA1L4H1 1573 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 LILRA1O75019 489 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 TFF3Q07654 80 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 GDF15Q99988 308 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 PPIFP30405 207 aaKnown RBP10.9□□□□□ -0.66
USP47-202ENST00000339865 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.66
USP47-202ENST00000339865 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.67
USP47-202ENST00000339865 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.67
USP47-202ENST00000339865 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.67
USP47-202ENST00000339865 C9JAW5 83 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 PSG4Q00888 419 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 UPK3AO75631 287 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
USP47-202ENST00000339865 LOC105371242A0A075B767 164 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 IGHV1OR21-1A0A087WYE8 117 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 CELA2BP08218 269 aaPredicted RBP10.89□□□□□ -0.67
USP47-202ENST00000339865 IFITM2Q01629 132 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 EDIL3O43854 480 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 AQP3Q92482 292 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 PAX1P15863 534 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 EGR4Q05215 589 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 GPBAR1Q8TDU6 330 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 A0A087WWC5 75 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 CTGFP29279 349 aa10.89□□□□□ -0.67
USP47-202ENST00000339865 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
USP47-202ENST00000339865 UMODP07911 640 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 POC1AQ8NBT0 407 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 LIFP15018 202 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 TM4SF4P48230 202 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 CIARTQ8N365 385 aaPredicted RBP10.88□□□□□ -0.67
USP47-202ENST00000339865 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 PSME4Q14997 1843 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
USP47-202ENST00000339865 HCFC1P51610 2035 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 DENND4AQ7Z401 1863 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 ISXQ2M1V0 245 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 ORMDL2Q53FV1 153 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 SERGEFQ9UGK8 458 aa10.88□□□□□ -0.67
USP47-202ENST00000339865 DLEU1O43261 78 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 ZXDCQ2QGD7 858 aaPredicted RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 LDLRAD1Q5T700 205 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 PRRC2AP48634 2157 aaKnown RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 A0A0G2JMM0 328 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 A0A1W2PPB8 328 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 KIR3DP1A8MWS1 328 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 LY6DQ14210 128 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 SCARF2Q96GP6 870 aaPredicted RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 LTBP3Q9NS15 1303 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 FABP5P3A8MUU1 101 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 IGLV3-25P01717 112 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 PRB1P04280 392 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 LAGE3Q14657 143 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 C8orf46Q8TAG6 207 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 TMEM186Q96B77 213 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 LEPROTO15243 131 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms