RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SLAQ13239 276 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
SCARB1-202ENST00000339570 IDI2-AS1Q9NZ38 188 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 IL19Q9UHD0 177 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 LOXL3P58215 753 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 PRSS46E5RG02 174 aa13.21□□□□□ -0.3
SCARB1-202ENST00000339570 CORTO00230 105 aa13.21□□□□□ -0.3
SCARB1-202ENST00000339570 TCTAP57738 103 aa13.21□□□□□ -0.3
SCARB1-202ENST00000339570 TEX43Q6ZNM6 134 aa13.21□□□□□ -0.3
SCARB1-202ENST00000339570 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.3
SCARB1-202ENST00000339570 RELNP78509 3460 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 MGST3O14880 152 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 YPEL1O60688 119 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-202ENST00000339570 DLX1P56177 255 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 TRIP6Q15654 476 aaKnown RBP13.2□□□□□ -0.3
SCARB1-202ENST00000339570 UNQ5815/PRO19632Q6UWF5 114 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 YPEL2Q96QA6 119 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 LSM4Q9Y4Z0 139 aaKnown RBP13.2□□□□□ -0.3
SCARB1-202ENST00000339570 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 BMPR1BO00238 502 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 APCSP02743 223 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 ZNF137PP52743 207 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
SCARB1-202ENST00000339570 ZFHX2Q9C0A1 2572 aaPredicted RBP13.2□□□□□ -0.3
SCARB1-202ENST00000339570 HSBP1O75506 76 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 LINC00869P0C866 280 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 CCL8P80075 99 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 TMEM136Q6ZRR5 245 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 JPT1Q9UK76 154 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 DPRXA6NFQ7 191 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 ORM2P19652 201 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
SCARB1-202ENST00000339570 WT1P19544 449 aaPredicted RBP13.18□□□□□ -0.3
SCARB1-202ENST00000339570 SELENOTP62341 195 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 LEMD1Q68G75 181 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
SCARB1-202ENST00000339570 APC2O95996 2303 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 TRGV10A0A0A0MS01 117 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 C21orf140B9A014 251 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 E7EUB6 86 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 TNXAQ16473 311 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
SCARB1-202ENST00000339570 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 MOSP00540 346 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 IGKV3-15P01624 115 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 UBALD2Q8IYN6 164 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 H1FXQ92522 213 aaKnown RBP13.18□□□□□ -0.3
SCARB1-202ENST00000339570 KCNS1Q96KK3 526 aa13.18□□□□□ -0.3
SCARB1-202ENST00000339570 SPTBN1Q01082 2364 aaKnown RBP13.17□□□□□ -0.3
SCARB1-202ENST00000339570 PTPRBP23467 1997 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 LRBAP50851 2863 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 M0R2Z0 102 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 PMCHL2Q9BQD1 86 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 SRRM5B3KS81 715 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 HYPMO75409 117 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 ZNF324O75467 553 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-202ENST00000339570 CCL3L1P16619 93 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 DIAPH2-AS1Q14236 149 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 COL5A1-AS1Q5SY13 56 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 TSKUQ8WUA8 353 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 RBM14Q96PK6 669 aaKnown RBP13.17□□□□□ -0.3
SCARB1-202ENST00000339570 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
SCARB1-202ENST00000339570 TDGF1P13385 188 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 CX3CL1P78423 397 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 C17orf58Q2M2W7 97 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 HCP5Q6MZN7 132 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 TCTEX1D1Q8N7M0 179 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 M0QZK8 103 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 SAA1P0DJI8 122 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-202ENST00000339570 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 RNF2Q99496 336 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 COMMD5Q9GZQ3 224 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 ISLRO14498 428 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 ENSAO43768 121 aaKnown RBP13.16□□□□□ -0.3
SCARB1-202ENST00000339570 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 PCP4P48539 62 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 PROCRQ9UNN8 238 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms