RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GAMTQ14353 236 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 SGMS2Q8NHU3 365 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 BET1LQ9NYM9 111 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 E7EUB6 86 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 APOA2P02652 100 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 PSG5Q15238 335 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 TMEM30BQ3MIR4 351 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 H0YJW9 148 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 AMBPP02760 352 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
LITAF-201ENST00000339430 LOXP28300 417 aaPredicted RBP13.22□□□□□ -0.29
LITAF-201ENST00000339430 OR10X1Q8NGY0 326 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 PRDM13Q9H4Q3 707 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 PLXNB1O43157 2135 aa13.22□□□□□ -0.29
LITAF-201ENST00000339430 NAV3Q8IVL0 2385 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 USP9XQ93008 2570 aaPredicted RBP13.21□□□□□ -0.29
LITAF-201ENST00000339430 KMT2BQ9UMN6 2715 aaPredicted RBP13.21□□□□□ -0.29
LITAF-201ENST00000339430 TYMSP04818 313 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 CD99P14209 185 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
LITAF-201ENST00000339430 MEF2CQ06413 473 aaPredicted RBP13.21□□□□□ -0.29
LITAF-201ENST00000339430 TMEM144Q7Z5S9 345 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 CHD6Q8TD26 2715 aa13.21□□□□□ -0.29
LITAF-201ENST00000339430 K7EN84 100 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 MT-CO2P00403 227 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 HLA-DRB5Q30154 266 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 C2orf83Q53S99 150 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 OSR1Q8TAX0 266 aaPredicted RBP13.21□□□□□ -0.3
LITAF-201ENST00000339430 FKBP11Q9NYL4 201 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 CTSZQ9UBR2 303 aa13.21□□□□□ -0.3
LITAF-201ENST00000339430 NDUFB3O43676 98 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 OR7C2O60412 319 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 HIST1H1BP16401 226 aaKnown RBP13.2□□□□□ -0.3
LITAF-201ENST00000339430 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
LITAF-201ENST00000339430 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 TEX38Q6PEX7 206 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 OR5B3Q8NH48 314 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 FLYWCH2Q96CP2 140 aaKnown RBP13.2□□□□□ -0.3
LITAF-201ENST00000339430 ACY3Q96HD9 319 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 SLC17A3O00476 420 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 DVL1O14640 695 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 OR10J4P0C629 311 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 RPL8P62917 257 aaKnown RBP13.2□□□□□ -0.3
LITAF-201ENST00000339430 OR10G8Q8NGN5 311 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 DYNLRB1Q9NP97 96 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
LITAF-201ENST00000339430 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
LITAF-201ENST00000339430 FNDC10F2Z333 226 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 LCN2P80188 198 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 LRRC10Q5BKY1 277 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 OR5AN1Q8NGI8 311 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 NDUFA4L2Q9NRX3 87 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
LITAF-201ENST00000339430 LRBAP50851 2863 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 TACC2O95359 2948 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 HRNRQ86YZ3 2850 aaPredicted RBP13.19□□□□□ -0.3
LITAF-201ENST00000339430 DOPEY1Q5JWR5 2465 aa13.19□□□□□ -0.3
LITAF-201ENST00000339430 RNF224P0DH78 156 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
LITAF-201ENST00000339430 SSBP2P81877 361 aaPredicted RBP13.18□□□□□ -0.3
LITAF-201ENST00000339430 CD69Q07108 199 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 FOXL1Q12952 345 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 OR5I1Q13606 314 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 OR1L8Q8NGR8 309 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 CRYBB3P26998 211 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 DLX1P56177 255 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
LITAF-201ENST00000339430 MUC15Q8N387 334 aa13.18□□□□□ -0.3
LITAF-201ENST00000339430 B9A039 149 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
LITAF-201ENST00000339430 ERHP84090 104 aaKnown RBP13.17□□□□□ -0.3
LITAF-201ENST00000339430 TMEM177Q53S58 311 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
LITAF-201ENST00000339430 OR4C13Q8NGP0 309 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
LITAF-201ENST00000339430 RITA1Q96K30 269 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
LITAF-201ENST00000339430 TECRQ9NZ01 308 aaKnown RBP13.17□□□□□ -0.3
LITAF-201ENST00000339430 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 IGHV3-72A0A0B4J1Y9 119 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 MORN5Q5VZ52 161 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 TPSG1Q9NRR2 321 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms