RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 COL8A1P27658 744 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 B2MP61769 119 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 PRSS8Q16651 343 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 C2orf83Q53S99 150 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 TPTE2P1Q5T6R2 138 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 FAM90A2PQ658T7 463 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 OR11H6Q8NGC7 330 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 OR51G1Q8NGK1 321 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 GSX1Q9H4S2 264 aaPredicted RBP5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 FKBP11Q9NYL4 201 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 DMRT1Q9Y5R6 373 aa5.92□□□□□ -1.46
SRFBP1-201ENST00000339397 IGHV3OR16-10A0A075B7F0 116 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 A0A1W2PPE2 198 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 PAGE4O60829 102 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 VENTXO95231 258 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 LINC00869P0C866 280 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 IL3RAP26951 378 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 OR10J1P30954 320 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 CDC34P49427 236 aaPredicted RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 ZNF90Q03938 601 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 VMA21Q3ZAQ7 101 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 LINC01559Q495D7 138 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 KHDC3LQ587J8 217 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 PPP1R27Q86WC6 154 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 ACTR3CQ9C0K3 210 aaPredicted RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 DOPEY2Q9Y3R5 2298 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 hCG_1809904A0A1W2PP81 198 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 A0A1W2PR64 198 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 A0A1W2PRV1 198 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 C17orf112F2Z3M2 114 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 RBP4P02753 201 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 HSPB1P04792 205 aaKnown RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 ARL14EPLP0DKL9 152 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 HOXB4P17483 251 aaPredicted RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 OPRK1P41145 380 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 LGALS7P47929 136 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 ERHP84090 104 aaKnown RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 HES1Q14469 280 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 MMDQ15546 238 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 VSTM2AQ8TAG5 236 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 CFHR4Q92496 578 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 NPIPB3Q92617 1050 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 GGACTQ9BVM4 153 aa5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 HELZ2Q9BYK8 2649 aaKnown RBP5.91□□□□□ -1.46
SRFBP1-201ENST00000339397 IGHV4-61A0A0C4DH41 118 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 A0A1W2PPV4 95 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 ODF3BA8MYP8 253 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 PF4P02776 101 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 PF4V1P10720 104 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 CTRB1P17538 263 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 NPPCP23582 126 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 CD69Q07108 199 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 ACOT6Q3I5F7 207 aaPredicted RBP5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 KLF17Q5JT82 389 aaPredicted RBP5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 CTRB2Q6GPI1 263 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 AURKAIP1Q9NWT8 199 aaPredicted RBP5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 SLC45A2Q9UMX9 530 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 SOX21Q9Y651 276 aaPredicted RBP5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 CCDC168Q8NDH2 2452 aa5.9□□□□□ -1.46
SRFBP1-201ENST00000339397 M0R1W7 72 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 CYB5BO43169 146 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 ATP5G3P48201 142 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 COMPP49747 757 aaPredicted RBP5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PRR20EP86478 221 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PRR20CP86479 221 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PRR20DP86480 221 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PRR20BP86481 221 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PRR20AP86496 221 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 PLGLAQ15195 96 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 ZNF674Q2M3X9 581 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 FAM120AOSQ5T036 256 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 TMEM144Q7Z5S9 345 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 SLC35E3Q7Z769 313 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 TEX45Q8NA69 505 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 TMEM37Q8WXS4 190 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 RPUSD4Q96CM3 377 aaKnown RBP5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 MISP3Q96FF7 219 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 AJUBAQ96IF1 538 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 TBX15Q96SF7 602 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 SLC25A33Q9BSK2 321 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 DERL1Q9BUN8 251 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 SIRPDQ9H106 197 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 DOK5Q9P104 306 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 S4R3C0 116 aa5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 FASNP49327 2511 aaKnown RBP5.9□□□□□ -1.47
SRFBP1-201ENST00000339397 CUBNO60494 3623 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 TRAV5A0A0B4J249 113 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 COLCA2A8K830 154 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 TEX22C9J3V5 150 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 TSPAN9O75954 239 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 TOX4O94842 621 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 MBP02144 154 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 RPL27AP46776 148 aaKnown RBP5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 MEF2BQ02080 365 aaPredicted RBP5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 ODF1Q14990 250 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 FAM78BQ5VT40 261 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms