RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 U3KQ87 197 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 K7EPK0 472 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 IGHV3-23P01764 117 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 CXCL3P19876 107 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 RRAS2P62070 204 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 CYCSP99999 105 aaKnown RBP10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 IL15RAQ13261 267 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 RAB32Q13637 225 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 PVRIGQ6DKI7 326 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 PINX1Q96BK5 328 aaKnown RBP10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 WDR89Q96FK6 387 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 S4R3C0 116 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 ANK2Q01484 3957 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
APOBEC3B-202ENST00000335760 ANKRD34BA5PLL1 514 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 H3BP45 60 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 I3L521 148 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 CORTO00230 105 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 LY86O95711 162 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 RPP30P78346 268 aaKnown RBP10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 RUNX1Q01196 453 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 DEFB136Q30KP8 78 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 ZNF343Q6P1L6 599 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 VN1R17PQ8TDU5 208 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 SMIM8Q96KF7 97 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 CXorf58Q96LI9 332 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 RAB40CQ96S21 281 aa10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.67
APOBEC3B-202ENST00000335760 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 I3L2K1 104 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 K7EIM0 57 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 L7N2F9 121 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 M0QZ24 198 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 TMEM50AO95807 157 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 MT-CO2P00403 227 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 PAX9P55771 341 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 ATP5IP56385 69 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 RAB11AP62491 216 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 VAMP2P63027 116 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 LRRC37A5PQ49AS3 106 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 Q6ZNX1 250 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR4F17Q8NGA8 305 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 RAX2Q96IS3 184 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR4C12Q96R67 309 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR4F4Q96R69 305 aa10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 STRAPQ9Y3F4 350 aaKnown RBP10.89□□□□□ -0.67
APOBEC3B-202ENST00000335760 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 TRBV7-1A0A0A6YYK4 115 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 TSPAN15O95858 294 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 IGHV3-48P01763 117 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 IFNA4P05014 189 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 OPRK1P41145 380 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 TAS2R30P59541 319 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 MLANAQ16655 118 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 RNASEH2CQ8TDP1 164 aaKnown RBP10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 DPF1Q92782 380 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 ZNF436Q9C0F3 470 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 C21orf62Q9NYP8 219 aa10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 PEF1Q9UBV8 284 aaKnown RBP10.88□□□□□ -0.67
APOBEC3B-202ENST00000335760 RPS10-NUDT3A0A1W2PQS6 291 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 CCL24O00175 119 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 RLN2P04090 185 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 HSPB1P04792 205 aaKnown RBP10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 PVALBP20472 110 aaPredicted RBP10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 ETV3LQ6ZN32 361 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 C11orf1Q9H5F2 150 aa10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 RANGRFQ9HD47 186 aaPredicted RBP10.87□□□□□ -0.67
APOBEC3B-202ENST00000335760 IGHV4OR15-8A0A075B7B6 117 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 A0A087WW49 117 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 LINC01619G3V211 115 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 TSC22D2O75157 780 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 DEDDO75618 318 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 PF4P02776 101 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 CLEC3BP05452 202 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 MYCNOSP40205 109 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 BCAP31P51572 246 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 MFAP4P55083 255 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 Q56UQ5 140 aa10.86□□□□□ -0.67
APOBEC3B-202ENST00000335760 FAM209BQ5JX69 171 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms