RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 J3QKU1 62 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 TDGF1P13385 188 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 GBF1Q92538 1859 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 NAT1P18440 290 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
C9orf47-201ENST00000334490 NCOR2Q9Y618 2525 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 FAM3BP58499 235 aaPredicted RBP12.42□□□□□ -0.42
C9orf47-201ENST00000334490 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 PTPN13Q12923 2485 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 TMEM144Q7Z5S9 345 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 FAM181BA6NEQ2 426 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 SNCGO76070 127 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 CD69Q07108 199 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
C9orf47-201ENST00000334490 SLC25A16P16260 332 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 LYPD2Q6UXB3 125 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 OR52E5Q8NH55 327 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 GAFA1Q96PS6 74 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 C12orf57Q99622 126 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 IGKV1D-17A0A075B6S4 117 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 NAPSAO96009 420 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 CKS2P33552 79 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 SAPCD1Q5SSQ6 148 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 PGLYRP4Q96LB8 373 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 H3BUX3 64 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 CGAP01215 116 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
C9orf47-201ENST00000334490 ELOBQ15370 118 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
C9orf47-201ENST00000334490 CCKARP32238 428 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 GPX4P36969 197 aaPredicted RBP12.4□□□□□ -0.42
C9orf47-201ENST00000334490 C10orf55Q5SWW7 151 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 C18orf12Q96KH6 178 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 PARLQ9H300 379 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 MALRD1Q5VYJ5 2156 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 LDLRAD4O15165 306 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 ZNF524Q96C55 264 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 CD99P14209 185 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 BTCP35070 178 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 HNRNPA3P51991 378 aaKnown RBP12.4□□□□□ -0.42
C9orf47-201ENST00000334490 MINOS1Q5TGZ0 78 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 MINOS1-NBL1R4GNA1 71 aa12.4□□□□□ -0.42
C9orf47-201ENST00000334490 MYOD1P15172 320 aa12.4□□□□□ -0.43
C9orf47-201ENST00000334490 PRCDQ00LT1 54 aa12.4□□□□□ -0.43
C9orf47-201ENST00000334490 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.43
C9orf47-201ENST00000334490 OR8A1Q8NGG7 326 aa12.4□□□□□ -0.43
C9orf47-201ENST00000334490 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.43
C9orf47-201ENST00000334490 IGHV1-3A0A0C4DH29 117 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 A6NNC1 897 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 TCRBV4S1A1TA0A5B7 111 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 MPZP25189 248 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 COQ2Q96H96 371 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 TRAV34A0A0B4J273 112 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 NPIPB6E9PJ23 425 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 SRSF7Q16629 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
C9orf47-201ENST00000334490 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 OOSP1A8MZH6 123 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 AMMECR1LQ6DCA0 310 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 Q6P435 159 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
C9orf47-201ENST00000334490 K7EM74 188 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 M0R1W7 72 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 RPL29P47914 159 aaKnown RBP12.38□□□□□ -0.43
C9orf47-201ENST00000334490 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 CD55P08174 381 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 OR10W1Q8NGF6 305 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 PRO3102Q9H379 93 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 BET1LQ9NYM9 111 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 TRAV41A0A0B4J266 112 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 NPFFO15130 113 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 MT-ND6P03923 174 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 HERVK_113P61574 105 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 TMEM155Q4W5P6 130 aa12.38□□□□□ -0.43
C9orf47-201ENST00000334490 FAM53AQ6NSI3 398 aaPredicted RBP12.38□□□□□ -0.43
C9orf47-201ENST00000334490 GCGP01275 180 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 ID3Q02535 119 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 CENPWQ5EE01 88 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 ZNF600Q6ZNG1 722 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 MYLKQ15746 1914 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 A0A0B4J293 547 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 C9JCJ5 164 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 C2orf83Q53S99 150 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 ZNF343Q6P1L6 599 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 MIR17HGQ75NE6 70 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms