RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 COQ2Q96H96 371 aa10.77□□□□□ -0.69
VSTM4-202ENST00000332853 MBD3L4A6NDZ8 208 aaPredicted RBP10.77□□□□□ -0.69
VSTM4-202ENST00000332853 MBD3L3A6NE82 208 aaPredicted RBP10.77□□□□□ -0.69
VSTM4-202ENST00000332853 MBD3L5A6NJ08 208 aaPredicted RBP10.77□□□□□ -0.69
VSTM4-202ENST00000332853 MBD3L2Q8NHZ7 208 aaPredicted RBP10.77□□□□□ -0.69
VSTM4-202ENST00000332853 C7orf69Q9H7B7 122 aa10.77□□□□□ -0.69
VSTM4-202ENST00000332853 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
VSTM4-202ENST00000332853 PGPEP1LA6NFU8 196 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 MAS1LP35410 378 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 TEX45Q8NA69 505 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 SDF2L1Q9HCN8 221 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 LY6HO94772 140 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 ZNF672Q499Z4 452 aaPredicted RBP10.76□□□□□ -0.69
VSTM4-202ENST00000332853 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
VSTM4-202ENST00000332853 AUP1Q9Y679 476 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 IGKV1D-17A0A075B6S4 117 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 LINC00473A8K010 186 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 SCGB1C2P0DMR2 95 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 KLRD1Q13241 179 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 DGAT2L7PQ6IED9 249 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 PEX7O00628 323 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 PYYP10082 97 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 CD99P14209 185 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 ATP5IP56385 69 aaPredicted RBP10.76□□□□□ -0.69
VSTM4-202ENST00000332853 C21orf62Q9NYP8 219 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 ETV2O00321 342 aaPredicted RBP10.76□□□□□ -0.69
VSTM4-202ENST00000332853 TIMM23O14925 209 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 NBR2O15453 112 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 Q6ZS92 163 aa10.76□□□□□ -0.69
VSTM4-202ENST00000332853 FAM106AQ4KMX7 169 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 ATOH7Q8N100 152 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 RNASEH2CQ8TDP1 164 aaKnown RBP10.75□□□□□ -0.69
VSTM4-202ENST00000332853 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 A0A0G2JRQ6 117 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 TMEM178BH3BS89 294 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 CDX1P47902 265 aaPredicted RBP10.75□□□□□ -0.69
VSTM4-202ENST00000332853 RPL23P62829 140 aaKnown RBP10.75□□□□□ -0.69
VSTM4-202ENST00000332853 VPS25Q9BRG1 176 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 NMUP48645 174 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 DLX6P56179 175 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 NMSQ5H8A3 153 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 TMEM144Q7Z5S9 345 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 GPX1P07203 203 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
VSTM4-202ENST00000332853 FOXA3P55318 350 aaPredicted RBP10.75□□□□□ -0.69
VSTM4-202ENST00000332853 RNASE7Q9H1E1 156 aaKnown RBP10.75□□□□□ -0.69
VSTM4-202ENST00000332853 SIAH2O43255 324 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 VENTXO95231 258 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 SPATA45Q537H7 98 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 PLA2G2CQ5R387 149 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 GAFA1Q96PS6 74 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 OBSL1O75147 1896 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 HLA-DRB1P01911 266 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 LYPD2Q6UXB3 125 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 Q9H3A6 140 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 ZNRD1Q9P1U0 126 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 PRCDQ00LT1 54 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 HIST1H1AQ02539 215 aaPredicted RBP10.74□□□□□ -0.69
VSTM4-202ENST00000332853 CRIM1Q9NZV1 1036 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
VSTM4-202ENST00000332853 TRAV5A0A0B4J249 113 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 GCGP01275 180 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 TCF23Q7RTU1 214 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 CACNG8Q8WXS5 425 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
VSTM4-202ENST00000332853 IGHV2-26A0A0B4J1V2 119 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 GPX4P36969 197 aaPredicted RBP10.73□□□□□ -0.69
VSTM4-202ENST00000332853 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 TGFAP01135 160 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 GNLYP22749 145 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 EFNB3Q15768 340 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 ELOVL1Q9BW60 279 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 RIF1Q5UIP0 2472 aaKnown RBP10.73□□□□□ -0.69
VSTM4-202ENST00000332853 RSPO1Q2MKA7 263 aaPredicted RBP10.73□□□□□ -0.69
VSTM4-202ENST00000332853 DOCK7Q96N67 2140 aa10.73□□□□□ -0.69
VSTM4-202ENST00000332853 ZNF318Q5VUA4 2279 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 DPRXA6NFQ7 191 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 TREML4Q6UXN2 200 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 LEPROTL1O95214 131 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 FAM53AQ6NSI3 398 aaPredicted RBP10.72□□□□□ -0.69
VSTM4-202ENST00000332853 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 IGHV1-8P0DP01 117 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 ASCL4Q6XD76 172 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 DUX5Q96PT3 197 aa10.72□□□□□ -0.69
VSTM4-202ENST00000332853 YLPM1P49750 1951 aaKnown RBP10.72□□□□□ -0.69
VSTM4-202ENST00000332853 COL8A2P25067 703 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms