RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HEATR5AQ86XA9 2040 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
CLN8-201ENST00000331222 HLA-DQA1P01909 254 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 LINC00158P58513 81 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 TIMM23BQ5SRD1 257 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 GATD1Q8NB37 220 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
CLN8-201ENST00000331222 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
CLN8-201ENST00000331222 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
CLN8-201ENST00000331222 CD55P08174 381 aa8.9□□□□□ -0.99
CLN8-201ENST00000331222 H7C1H1 209 aa8.9□□□□□ -0.99
CLN8-201ENST00000331222 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.99
CLN8-201ENST00000331222 HLA-DQB1P01920 261 aa8.9□□□□□ -0.99
CLN8-201ENST00000331222 PAX2Q02962 417 aa8.9□□□□□ -0.99
CLN8-201ENST00000331222 EP300Q09472 2414 aaPredicted RBP8.89□□□□□ -0.99
CLN8-201ENST00000331222 IGHV2OR16-5A0A0B4J2B6 119 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 OR11H4Q8NGC9 324 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 AQP3Q92482 292 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 CACNA1BQ00975 2339 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 CD8AP01732 235 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 NDPQ00604 133 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 PSMG4Q5JS54 123 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 VCX2Q9H322 139 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 TMEM50AO95807 157 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 VAX1Q5SQQ9 334 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 NRIP2Q9BQI9 281 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 ATP5G3P48201 142 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 CFHR3Q02985 330 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 IGLV1-36A0A0B4J1U3 117 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 GZMBP10144 247 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 GNLYP22749 145 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 CKS1BP61024 79 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
CLN8-201ENST00000331222 TMEM54Q969K7 222 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 ASCL2Q99929 193 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 UQCR10Q9UDW1 63 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 OR11H12B2RN74 326 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 TCF23Q7RTU1 214 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 OR11H1Q8NG94 326 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 OR11H2Q8NH07 326 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 VKORC1Q9BQB6 163 aa8.89□□□□□ -0.99
CLN8-201ENST00000331222 TRAV14DV4A0A0A6YYC5 116 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 RAMP3O60896 148 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 ZGRF1Q86YA3 2104 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 ZIC4Q8N9L1 334 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 PRSS22Q9GZN4 317 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 IGKV1D-43A0A0B4J1Z2 117 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 FAM57AQ8TBR7 257 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 PKIBQ9C010 78 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 EGR4Q05215 589 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 CSRP2Q16527 193 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 LURAP1LQ8IV03 231 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 INS-IGF2F8WCM5 200 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 INSP01308 110 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 GLRXP35754 106 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 LIMS1P48059 325 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 RHOGP84095 191 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 TMEM105Q8N8V8 129 aa8.88□□□□□ -0.99
CLN8-201ENST00000331222 ZNF625Q96I27 306 aaPredicted RBP8.88□□□□□ -0.99
CLN8-201ENST00000331222 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 CD28P10747 220 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 TMEM187Q14656 261 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 OR52E5Q8NH55 327 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 SSC4DQ8WTU2 575 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 Q96M66 194 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 G6PC2Q9NQR9 355 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 CEACAM1P13688 526 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 RPL15P61313 204 aaKnown RBP8.87□□□□□ -0.99
CLN8-201ENST00000331222 TBR1Q16650 682 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 TANC2Q9HCD6 1990 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 C1orf122Q6ZSJ8 110 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 GPR132Q9UNW8 380 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 LTBP4Q8N2S1 1624 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 DPRXA6NFQ7 191 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 HIGD1CA8MV81 97 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 MEF2CQ06413 473 aaPredicted RBP8.87□□□□□ -0.99
CLN8-201ENST00000331222 PSG7Q13046 419 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 ACTL10Q5JWF8 245 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 SLC25A28Q96A46 364 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 COQ2Q96H96 371 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 CRIM1Q9NZV1 1036 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 ZNF474Q6S9Z5 364 aaPredicted RBP8.87□□□□□ -0.99
CLN8-201ENST00000331222 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
CLN8-201ENST00000331222 FNDC4Q9H6D8 234 aaPredicted RBP8.87□□□□□ -0.99
CLN8-201ENST00000331222 A0A1B0GV90 55 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 SMIM6P0DI80 62 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 Q5PR19 223 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 IGKV2-40A0A087WW87 121 aaPredicted RBP8.86□□□□□ -0.99
CLN8-201ENST00000331222 IGKV2D-40P01614 121 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms