RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 DYSFO75923 2080 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 A0A1W2PN81 502 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 M0QZ24 198 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 TIMM8AO60220 97 aaPredicted RBP6.5□□□□□ -1.37
VMA21-201ENST00000330374 DUTP33316 252 aaKnown RBP6.5□□□□□ -1.37
VMA21-201ENST00000330374 SLAQ13239 276 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 NIT1Q86X76 327 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 OR4C5Q8NGB2 326 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 S1PR3Q99500 378 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 FAM173AQ9BQD7 235 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 CBY3A6NI87 242 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 M0R2Z0 102 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 NPY1RP25929 384 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 MFAP2P55001 183 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 RAB31Q13636 194 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 LHFPL4Q7Z7J7 247 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 ZNF439Q8NDP4 499 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 SLC24A4Q8NFF2 622 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 TRIB1Q96RU8 372 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 MCRIP2Q9BUT9 160 aaKnown RBP6.5□□□□□ -1.37
VMA21-201ENST00000330374 SFXN3Q9BWM7 321 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 GNB1LQ9BYB4 327 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 PLSCR4Q9NRQ2 329 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 ZNF355PQ9NSJ1 428 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 CLEC5AQ9NY25 188 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 PLCE1Q9P212 2302 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TSPOP30536 169 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 CTRLP40313 264 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 RPL8P62917 257 aaKnown RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 TNXAQ16473 311 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TCTEX1D1Q8N7M0 179 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TMEM105Q8N8V8 129 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 NAV3Q8IVL0 2385 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 MPDU1O75352 247 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 TRAT1Q6PIZ9 186 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 KLF14Q8TD94 323 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 C22orf15Q8WYQ4 148 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 BCL2L2Q92843 193 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 CDX2Q99626 313 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 BET1LQ9NYM9 111 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 POLEQ07864 2286 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TRAV5A0A0B4J249 113 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 LNP1A1A4G5 178 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 A4D1N5 150 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 CX3CL1P78423 397 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 RPL19P84098 196 aaKnown RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 DCAF12Q5T6F0 453 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 SLC35E4Q6ICL7 350 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 CNEP1R1Q8N9A8 125 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 ALKBH7Q9BT30 221 aaPredicted RBP6.49□□□□□ -1.37
VMA21-201ENST00000330374 GVINP1Q7Z2Y8 2422 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TANC2Q9HCD6 1990 aa6.49□□□□□ -1.37
VMA21-201ENST00000330374 TRGV10A0A0A0MS01 117 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 CRYABP02511 175 aaKnown RBP6.48□□□□□ -1.37
VMA21-201ENST00000330374 ESDP10768 282 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 VDAC2P45880 294 aaPredicted RBP6.48□□□□□ -1.37
VMA21-201ENST00000330374 PRRX1P54821 245 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 ACP7Q6ZNF0 438 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 LYG1Q8N1E2 194 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 KIR3DL3Q8N743 410 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 KLHDC1Q8N7A1 406 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 ZNRF1Q8ND25 227 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 LRRC29Q8WV35 223 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 NABP2Q9BQ15 211 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
VMA21-201ENST00000330374 PLAUP00749 431 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 AMY1AP04745 511 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 ZNF134P52741 427 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
VMA21-201ENST00000330374 DHRS13Q6UX07 377 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 ZNF738Q8NE65 137 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 ARL2-SNX15V9GYD0 113 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 GGTLC3B5MD39 225 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 FAM201AQ5SY85 155 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 DPF1Q92782 380 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 RBX1P62877 108 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 TXNDC17Q9BRA2 123 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 PKDREJQ9NTG1 2253 aa6.48□□□□□ -1.37
VMA21-201ENST00000330374 TNRC6BQ9UPQ9 1833 aaKnown RBP6.47□□□□□ -1.37
VMA21-201ENST00000330374 WDR82Q6UXN9 313 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
VMA21-201ENST00000330374 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
VMA21-201ENST00000330374 CD177Q8N6Q3 437 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 OR2D3Q8NGH3 330 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 IGLL1P15814 213 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 COTL1Q14019 142 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 ZNF766Q5HY98 468 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 C11orf53Q8IXP5 236 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 OR9G1Q8NH87 305 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 OR8B2Q96RD0 313 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
VMA21-201ENST00000330374 VCX2Q9H322 139 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms