RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.5
SSBP3-201ENST00000326956 KBTBD11-OT1A0A1B0GTJ5 212 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 KIR2DL2P43627 348 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-201ENST00000326956 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 SLC25A33Q9BSK2 321 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 ZNF257Q9Y2Q1 563 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 SVILO95425 2214 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 CADP27708 2225 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 IGHV1-18A0A0C4DH31 117 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 M0R2Z0 102 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 UPK2O00526 184 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 SPRY3O43610 288 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 SELENOVP59797 346 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 UTF1Q5T230 341 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 VHLLQ6RSH7 139 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
SSBP3-201ENST00000326956 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 HINT1P49773 126 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 MRPL32Q9BYC8 188 aaKnown RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 BET1LQ9NYM9 111 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 MRPL27Q9P0M9 148 aaKnown RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 SLAQ13239 276 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 MLANAQ16655 118 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 C17orf58Q2M2W7 97 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SSBP3-201ENST00000326956 C9orf106Q8NAJ2 232 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 GPR179Q6PRD1 2367 aa11.94□□□□□ -0.5
SSBP3-201ENST00000326956 COX7A2P2O60397 106 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 ZNF883P0CG24 379 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 POU2AF1Q16633 256 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 C2orf83Q53S99 150 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 Q56UQ5 140 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 DEFB108BQ8NET1 73 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 IGF2BP2-AS1Q96M15 143 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 SAP30LQ9HAJ7 183 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
SSBP3-201ENST00000326956 LINC00479Q96M42 142 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 CFHR2P36980 270 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 CAMPP49913 170 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 RASL11AQ6T310 242 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-201ENST00000326956 PNKDQ8N490 385 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 ITLN1Q8WWA0 313 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 FAM168AQ92567 244 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
SSBP3-201ENST00000326956 NCOR1O75376 2440 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 PCP4P48539 62 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 CD69Q07108 199 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 TNXAQ16473 311 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 DHRS13Q6UX07 377 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 OR5B3Q8NH48 314 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 PRRC2CQ9Y520 2896 aaKnown RBP11.92□□□□□ -0.5
SSBP3-201ENST00000326956 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
SSBP3-201ENST00000326956 TSPOP30536 169 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 KLF3P57682 345 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-201ENST00000326956 TBR1Q16650 682 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
SSBP3-201ENST00000326956 YLPM1P49750 1951 aaKnown RBP11.92□□□□□ -0.5
SSBP3-201ENST00000326956 IGKV1-16P04430 117 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 UBE2G1P62253 170 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 ASPHD1Q5U4P2 390 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 OR10W1Q8NGF6 305 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 OR1L8Q8NGR8 309 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 RND1Q92730 232 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 M0R1B8 84 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 CGB3P0DN86 165 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 CGB7P0DN87 165 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 RNASE2P10153 161 aaKnown RBP11.91□□□□□ -0.5
SSBP3-201ENST00000326956 CCL11P51671 97 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 C10orf113Q5VZT2 155 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 OR1L4Q8NGR5 311 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 ORAOV1Q8WV07 137 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
SSBP3-201ENST00000326956 PRR33A8MZF0 331 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 DLL1O00548 723 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 IGHG3P01860 377 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 APOA2P02652 100 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 HIST1H1EP10412 219 aaKnown RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 MAJINQ3KP22 176 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 ZNF738Q8NE65 137 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms