RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SRRM4A7MD48 611 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 ST6GALNAC3Q8NDV1 305 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 NPIPB3Q92617 1050 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TXNDC17Q9BRA2 123 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM106BQ9NUM4 274 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TXN2Q99757 166 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF355PQ9NSJ1 428 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 A6NNC1 897 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 KLK10O43240 276 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 MOSP00540 346 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 IGHV1-46P01743 117 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 MFAP2P55001 183 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 PLA2G2CQ5R387 149 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 OR52E5Q8NH55 327 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 DIRC2Q96SL1 478 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 ADGRG4Q8IZF6 3080 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 F2RL2O00254 374 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 SLC25A17O43808 307 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 IGLV1-44P01699 117 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 DLX1P56177 255 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 TIMM23BQ5SRD1 257 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
HMGCS1-201ENST00000325110 LAMA5O15230 3695 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 UBE2G1P62253 170 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 LOXL4Q96JB6 756 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 TEX50A0A1B0GTY4 177 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 DIRC3C9JPN6 131 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 H0Y8G0 127 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 Q6ZWC4 215 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM144Q7Z5S9 345 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 OR1B1Q8NGR6 318 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 SAP30LQ9HAJ7 183 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 MKRN2OSH3BPM6 223 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 UPK2O00526 184 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 TBL2Q9Y4P3 447 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-201ENST00000325110 OR1L8Q8NGR8 309 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 HSBP1O75506 76 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 SLC25A5P05141 298 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 GNG5P63218 68 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 PLGLAQ15195 96 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 SEM1Q6ZVN7 128 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 TNFRSF1AP19438 455 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 BRS3P32247 399 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 C22orf34Q6ZV56 151 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
HMGCS1-201ENST00000325110 TRGV8A0A0C4DH27 118 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 CD40P25942 277 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 GPR6P46095 362 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 MORN5Q5VZ52 161 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 C10orf113Q5VZT2 155 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 TMEM108Q6UXF1 575 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF835Q9Y2P0 537 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 FAM90A9PA6NNJ1 464 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 OR2D3Q8NGH3 330 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.73
HMGCS1-201ENST00000325110 PDLIM4P50479 330 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 C1orf185Q5T7R7 199 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 OR5B3Q8NH48 314 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 C2orf88Q9BSF0 95 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 RPUSD1Q9UJJ7 312 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 TFPI2P48307 235 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 LGALS4P56470 323 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 TNXAQ16473 311 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 LEMD1Q68G75 181 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 C1orf159Q96HA4 380 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 NDUFB3O43676 98 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms