RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CLDN14O95500 239 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 HBDP02042 147 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 APOHP02749 345 aaPredicted RBP8.32□□□□□ -1.08
COL12A1-201ENST00000322507 NUBP1P53384 320 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 K7EP13 123 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 TMEM171Q8WVE6 324 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 FMC1Q96HJ9 113 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 TFPI2P48307 235 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 TRBV20OR9-2A0A075B6H5 130 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 F8WEM9 126 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 CRYBB3P26998 211 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 HIST3H2BBQ8N257 126 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 MBNL2Q5VZF2 373 aaKnown RBP8.31□□□□□ -1.08
COL12A1-201ENST00000322507 FAM90A2PQ658T7 463 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 NABP2Q9BQ15 211 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 TBR1Q16650 682 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 CBLN3Q6UW01 205 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 SSMEM1Q8WWF3 244 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 FOXH1O75593 365 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 IGHMP01871 453 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 ARL14EPLP0DKL9 152 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 ANKRD34AQ69YU3 496 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 UCP1P25874 307 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 CACNG8Q8WXS5 425 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 H0YL77 283 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 BHLHA9Q7RTU4 235 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 GVQW1Q8N7I0 195 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 A0A0J9YW62 118 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 SERF1AO75920 110 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 COX7A1P24310 79 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
COL12A1-201ENST00000322507 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 CDKN1AP38936 164 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 LEPP41159 167 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 PLCE1Q9P212 2302 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 VSIG8P0DPA2 414 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 SOCS1O15524 211 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 SUMO4Q6EEV6 95 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 KLF17Q5JT82 389 aaPredicted RBP8.3□□□□□ -1.08
COL12A1-201ENST00000322507 SPINK14Q6IE38 97 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 LEPROTO15243 131 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 AQP3Q92482 292 aa8.3□□□□□ -1.08
COL12A1-201ENST00000322507 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 C1orf100Q5SVJ3 147 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 ZNF818PQ6ZRF7 136 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 HLA-DQB1P01920 261 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 TRBV5-5A0A0J9YX44 114 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 A0A1B0GTI1 187 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 RND3P61587 244 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 ZNF146Q15072 292 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 WNT2BQ93097 391 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 SORL1Q92673 2214 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 SIP14410 1827 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 IGHV5-10-1A0A0J9YXX1 117 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 TCF20Q9UGU0 1960 aaKnown RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 CYP2G1PQ6ZSU1 146 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 SMIM8Q96KF7 97 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 CCL28Q9NRJ3 127 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 A0A1W2PPC1 479 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 A0A1W2PQF6 199 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 A8MWP6 167 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 IQCF6A8MYZ5 107 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 MYEOVQ96EZ4 313 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 PLA2G3Q9NZ20 509 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 FNDC1Q4ZHG4 1894 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 NRXN2Q9P2S2 1712 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 TM4SF5O14894 197 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 SMAD7O15105 426 aaKnown RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 KLF4O43474 513 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 WFDC11Q8NEX6 87 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 FAM90A27PA6NNH2 459 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 RPL27AP46776 148 aaKnown RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 ZNRF1Q8ND25 227 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 AURKAIP1Q9NWT8 199 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 MDKP21741 143 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-201ENST00000322507 IL18BPO95998 194 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 CENPWQ5EE01 88 aa8.29□□□□□ -1.08
COL12A1-201ENST00000322507 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 PCSK4Q6UW60 755 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 FAM214BQ7L5A3 538 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 FOXI3A8MTJ6 420 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-201ENST00000322507 CT62P0C5K7 136 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 ZNF721Q8TF20 911 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 PPP1R3EQ9H7J1 279 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 CD200R1LQ6Q8B3 271 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 LYZL2Q7Z4W2 148 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms