RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.7
PRPF18-201ENST00000320054 ZNF345Q14585 488 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 ETV3LQ6ZN32 361 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 OR4F5Q8NH21 305 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 FANCD2OSQ96PS1 177 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.7
PRPF18-201ENST00000320054 CUBNO60494 3623 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 TRBV9A0A0B4J1U6 114 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 PRSS46E5RG02 174 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 IFNA4P05014 189 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 OR2F1Q13607 317 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 EXOSC2Q13868 293 aaKnown RBP10.64□□□□□ -0.71
PRPF18-201ENST00000320054 SLC25A24Q6NUK1 477 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 C19orf35Q6ZS72 473 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 OR10P1Q8NGE3 313 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 THYN1Q9P016 225 aa10.64□□□□□ -0.71
PRPF18-201ENST00000320054 PAIP2BQ9ULR5 123 aaKnown RBP10.64□□□□□ -0.71
PRPF18-201ENST00000320054 A0A0D9SG52 128 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 CST7O76096 145 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 S100A11P31949 105 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 GPX4P36969 197 aaPredicted RBP10.63□□□□□ -0.71
PRPF18-201ENST00000320054 HBG1P69891 147 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 HBG2P69892 147 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 NHLH2Q02577 135 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 OR8G2PQ6IF36 304 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
PRPF18-201ENST00000320054 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 COMMD1Q8N668 190 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 NECAP1Q8NC96 275 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
PRPF18-201ENST00000320054 GGACTQ9BVM4 153 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 SLA2Q9H6Q3 261 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 ZC4H2Q9NQZ6 224 aa10.63□□□□□ -0.71
PRPF18-201ENST00000320054 RPS10-NUDT3A0A1W2PQS6 291 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 FNDC10F2Z333 226 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 I3L2K1 104 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 PRH1P02810 166 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
PRPF18-201ENST00000320054 ELANEP08246 267 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 CXCL2P19875 107 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 PSMB8P28062 276 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
PRPF18-201ENST00000320054 DLK1P80370 383 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 CD69Q07108 199 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 SLC38A11Q08AI6 406 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 ARL16Q0P5N6 197 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 FOXE3Q13461 319 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 ATP6V1FQ16864 119 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 ETFRF1Q6IPR1 90 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 RNF152Q8N8N0 203 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
PRPF18-201ENST00000320054 TAF15Q92804 592 aaKnown RBP eCLIP10.62□□□□□ -0.71
PRPF18-201ENST00000320054 MISP3Q96FF7 219 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 ZNF355PQ9NSJ1 428 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 FBXL7Q9UJT9 491 aa10.62□□□□□ -0.71
PRPF18-201ENST00000320054 A0A1B0GUS0 222 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 BOLA2-SMG1P6H3BVE0 249 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 K7EIM0 57 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 PF4V1P10720 104 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 RHOGP84095 191 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 SRSF2Q01130 221 aaKnown RBP10.61□□□□□ -0.71
PRPF18-201ENST00000320054 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
PRPF18-201ENST00000320054 ZNF329Q86UD4 541 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 C9orf62Q8N4C0 152 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 VN1R17PQ8TDU5 208 aa10.61□□□□□ -0.71
PRPF18-201ENST00000320054 BSCL2Q96G97 398 aaPredicted RBP10.61□□□□□ -0.71
PRPF18-201ENST00000320054 FNDC4Q9H6D8 234 aaPredicted RBP10.61□□□□□ -0.71
PRPF18-201ENST00000320054 TAAR5O14804 337 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 OR2J3O76001 311 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 DFFBO76075 338 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 NDUFB8O95169 186 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 MT-CO2P00403 227 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 TRGV3P03979 118 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 OPRK1P41145 380 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 RAB9AP51151 201 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 AP2S1P53680 142 aaPredicted RBP10.6□□□□□ -0.71
PRPF18-201ENST00000320054 PROK1P58294 105 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 VWC2Q2TAL6 325 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 SLC16A13Q7RTY0 426 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 KLHDC1Q8N7A1 406 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 CXorf58Q96LI9 332 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 MS4A10Q96PG2 267 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 TMEM147Q9BVK8 224 aa10.6□□□□□ -0.71
PRPF18-201ENST00000320054 FBXL17Q9UF56 701 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms