RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 GATA4P43694 442 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 ZNRF1Q8ND25 227 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 OR1L6Q8NGR2 347 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
USH1C-202ENST00000318024 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
USH1C-202ENST00000318024 DYNLRB1Q9NP97 96 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 RNF7Q9UBF6 113 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 TRBV9A0A0B4J1U6 114 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 DEFB108AA8MXU0 73 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 COL8A2P25067 703 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 CFHR2P36980 270 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 OR52E5Q8NH55 327 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 GNB1LQ9BYB4 327 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
USH1C-202ENST00000318024 RBMXL2O75526 392 aaKnown RBP12.97□□□□□ -0.33
USH1C-202ENST00000318024 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 MRGPRDQ8TDS7 321 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 SAP30LQ9HAJ7 183 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 GNB4Q9HAV0 340 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 C15orf65H3BRN8 121 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 MMP23AO75900 390 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 AREGP15514 252 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
USH1C-202ENST00000318024 SPATA31B1PQ5VZV4 182 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
USH1C-202ENST00000318024 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 CCL17Q92583 94 aa12.97□□□□□ -0.33
USH1C-202ENST00000318024 HRNRQ86YZ3 2850 aaPredicted RBP12.97□□□□□ -0.33
USH1C-202ENST00000318024 SNURFLB1AK76 121 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 FCN1O00602 326 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 OR10J4P0C629 311 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 SSTR5P35346 364 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 IER3P46695 156 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 MMD2Q8IY49 270 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 RNF2Q99496 336 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 DCTN5Q9BTE1 182 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 SEPSECSQ9HD40 501 aaKnown RBP12.96□□□□□ -0.33
USH1C-202ENST00000318024 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
USH1C-202ENST00000318024 TNFRSF1AP19438 455 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 EFNB3Q15768 340 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 FAM90A1Q86YD7 464 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 MUC15Q8N387 334 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 NINJ1Q92982 152 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 ZFP30Q9Y2G7 519 aa12.96□□□□□ -0.34
USH1C-202ENST00000318024 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
USH1C-202ENST00000318024 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 C19orf84I3L1E1 186 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 TMEM11P17152 192 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 LOXP28300 417 aaPredicted RBP12.95□□□□□ -0.34
USH1C-202ENST00000318024 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
USH1C-202ENST00000318024 ZNF672Q499Z4 452 aaPredicted RBP12.95□□□□□ -0.34
USH1C-202ENST00000318024 COL5A1-AS1Q5SY13 56 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 PSG11Q9UQ72 335 aa12.95□□□□□ -0.34
USH1C-202ENST00000318024 FOXH1O75593 365 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 TFPI2P48307 235 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 CX3CL1P78423 397 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 RELBQ01201 579 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 RPEL1Q2QD12 228 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 TMEM136Q6ZRR5 245 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 FLNCQ14315 2725 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 B9A039 149 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 NDUFB8O95169 186 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 HTD2P86397 168 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 OR5I1Q13606 314 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 ABHD12Q8N2K0 398 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 CCL13Q99616 98 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 SAMD10Q9BYL1 202 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 ARL2-SNX15V9GYD0 113 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 DYSFO75923 2080 aa12.94□□□□□ -0.34
USH1C-202ENST00000318024 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 REG1AP05451 166 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 ADH4P08319 380 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 SIGLECL1Q8N7X8 197 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 NPVFQ9HCQ7 196 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 NRN1Q9NPD7 142 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 TBL2Q9Y4P3 447 aaKnown RBP12.93□□□□□ -0.34
USH1C-202ENST00000318024 A0A1W2PS18 150 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 RAB7AP51149 207 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 PRR20EP86478 221 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 PRR20CP86479 221 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 PRR20DP86480 221 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 PRR20BP86481 221 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 PRR20AP86496 221 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 SSMEM1Q8WWF3 244 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 RCHY1Q96PM5 261 aa12.93□□□□□ -0.34
USH1C-202ENST00000318024 LYNX1G3V0Z9 82 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 FCGR3BO75015 233 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 MT-ND6P03923 174 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 IGLC2P0DOY2 106 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 IGLC3P0DOY3 106 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms