RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 ZNRD1Q9P1U0 126 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 APELAP0DMC3 54 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 STUMQ69YW2 141 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 Q6ZWC4 215 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 TMEM144Q7Z5S9 345 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 ST6GALNAC3Q8NDV1 305 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 OR10X1Q8NGY0 326 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 OR52E5Q8NH55 327 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 BLNKQ8WV28 456 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 DIRC2Q96SL1 478 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 RNF7Q9UBF6 113 aa8.65□□□□□ -1.03
COL3A1-202ENST00000317840 UBE2G1P62253 170 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 K7EN84 100 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 CCL21O00585 134 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 CHRNB4P30926 498 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 Q6ZN92 141 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 GNB4Q9HAV0 340 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 KBTBD11-OT1A0A1B0GTJ5 212 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 LINC00869P0C866 280 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 ORM2P19652 201 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 UTF1Q5T230 341 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 DUX4L9Q6RFH8 374 aaPredicted RBP8.64□□□□□ -1.03
COL3A1-202ENST00000317840 OR10W1Q8NGF6 305 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
COL3A1-202ENST00000317840 M0QZK8 103 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 IGKV1-16P04430 117 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
COL3A1-202ENST00000317840 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
COL3A1-202ENST00000317840 OR5B3Q8NH48 314 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 LINC01560Q8TB33 94 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 ZNF355PQ9NSJ1 428 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 GOLT1BQ9Y3E0 138 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 TOX4O94842 621 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 APCSP02743 223 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 TFPI2P48307 235 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 EIF4EBP1Q13541 118 aaPredicted RBP8.63□□□□□ -1.03
COL3A1-202ENST00000317840 ZNF439Q8NDP4 499 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 IDI2-AS1Q9NZ38 188 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 ZFYVE26Q68DK2 2539 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 NOTCH2Q04721 2471 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 KMT2EQ8IZD2 1858 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 MT-ND6P03923 174 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 YPEL3P61236 119 aaPredicted RBP8.63□□□□□ -1.03
COL3A1-202ENST00000317840 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 SPRNQ5BIV9 151 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 DMDP11532 3685 aa8.63□□□□□ -1.03
COL3A1-202ENST00000317840 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 hADV38S2A0JD32 116 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 FAM90A9PA6NNJ1 464 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 H0Y8G0 127 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 TM4SF5O14894 197 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
COL3A1-202ENST00000317840 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 LINC00479Q96M42 142 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 IGHV3-21A0A0B4J1V1 117 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 LGALS4P56470 323 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 C1orf162Q8NEQ5 155 aaPredicted RBP8.62□□□□□ -1.03
COL3A1-202ENST00000317840 SNRNP40Q96DI7 357 aaKnown RBP8.62□□□□□ -1.03
COL3A1-202ENST00000317840 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
COL3A1-202ENST00000317840 NAV3Q8IVL0 2385 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 A0A1W2PRD5 423 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 A0A1W2PRF3 423 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 A0A1W2PRM7 423 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 NKX6-3A6NJ46 265 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 LOXL3P58215 753 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 Q8N7P7 452 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 OR2D3Q8NGH3 330 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 MALRD1Q5VYJ5 2156 aa8.62□□□□□ -1.03
COL3A1-202ENST00000317840 TDGF1P3P51864 188 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 LY6DQ14210 128 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 Q56UQ5 140 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 C22orf15Q8WYQ4 148 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 C9JCJ5 164 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 TNFSF13O75888 250 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 SLC25A5P05141 298 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 REG1AP05451 166 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 PYYP10082 97 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 AREGP15514 252 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 BPIFB3P59826 476 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 MBNL2Q5VZF2 373 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 FAM90A1Q86YD7 464 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 FLYWCH2Q96CP2 140 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 PAXXQ9BUH6 204 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 LSM4Q9Y4Z0 139 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 H3BTX0 84 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 GLRXP35754 106 aa8.61□□□□□ -1.03
COL3A1-202ENST00000317840 SUB1P53999 127 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 RPL8P62917 257 aaKnown RBP8.61□□□□□ -1.03
COL3A1-202ENST00000317840 C10orf113Q5VZT2 155 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms