RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PPP1R35Q8TAP8 253 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
SKA3-202ENST00000314759 CADP27708 2225 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 IGHV1-18A0A0C4DH31 117 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 IGLV1-44P01699 117 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 RPL19P84098 196 aaKnown RBP10.98□□□□□ -0.65
SKA3-202ENST00000314759 COTL1Q14019 142 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 ETFRF1Q6IPR1 90 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 TMEM178AQ8NBL3 297 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 ZNF439Q8NDP4 499 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 GCM1Q9NP62 436 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 K7EP13 123 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 SLAQ13239 276 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 MLANAQ16655 118 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 PRR31Q5SQ13 230 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
SKA3-202ENST00000314759 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 J3QR06 171 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 AMY1AP04745 511 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
SKA3-202ENST00000314759 CDKN1BP46527 198 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 C9orf106Q8NAJ2 232 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 FAM168AQ92567 244 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 BORCS7Q96B45 105 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 IGF2BP2-AS1Q96M15 143 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 BET1LQ9NYM9 111 aa10.98□□□□□ -0.65
SKA3-202ENST00000314759 ITGB1BP1O14713 200 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 ZNF883P0CG24 379 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 PPOXP50336 477 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 TNXAQ16473 311 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 STUMQ69YW2 141 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 C1orf162Q8NEQ5 155 aaPredicted RBP10.97□□□□□ -0.65
SKA3-202ENST00000314759 ARRDC1-AS1Q9H2J1 176 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 PLEKHA3Q9HB20 300 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 SERTAD4Q9NUC0 356 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 MRPS16Q9Y3D3 137 aaKnown RBP10.97□□□□□ -0.65
SKA3-202ENST00000314759 IGHV2-26A0A0B4J1V2 119 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 CFHR2P36980 270 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 MZT1Q08AG7 82 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 COX19Q49B96 90 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 Q56UQ5 140 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 FAM201AQ5SY85 155 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
SKA3-202ENST00000314759 TECTAO75443 2155 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 M0QZ24 198 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 HLA-DQA1P01909 254 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 IGLL1P15814 213 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 FBLN7Q53RD9 439 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 OR9G1Q8NH87 305 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 OR2V2Q96R30 315 aa10.96□□□□□ -0.65
SKA3-202ENST00000314759 SSBP3Q9BWW4 388 aaPredicted RBP10.96□□□□□ -0.65
SKA3-202ENST00000314759 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.66
SKA3-202ENST00000314759 DSCAMO60469 2012 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 CACNA1GO43497 2377 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 SRRM4A7MD48 611 aaKnown RBP10.96□□□□□ -0.66
SKA3-202ENST00000314759 APCSP02743 223 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 PRCDQ00LT1 54 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 POU2AF1Q16633 256 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 DUX4L9Q6RFH8 374 aaPredicted RBP10.96□□□□□ -0.66
SKA3-202ENST00000314759 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.66
SKA3-202ENST00000314759 LOXL4Q96JB6 756 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 LINC00479Q96M42 142 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 PRNDQ9UKY0 176 aa10.96□□□□□ -0.66
SKA3-202ENST00000314759 KBTBD11-OT1A0A1B0GTJ5 212 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 IGHG3P01860 377 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 REG1AP05451 166 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 ST6GALNAC6Q969X2 333 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 PCNX2A6NKB5 2137 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 IGLC7A0M8Q6 106 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 TAS2R45P59539 299 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 C19orf35Q6ZS72 473 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 RNF24Q9Y225 148 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 ICE1Q9Y2F5 2266 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 UPK2O00526 184 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 LHBP01229 141 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
SKA3-202ENST00000314759 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 PNKDQ8N490 385 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 OR4C5Q8NGB2 326 aa10.95□□□□□ -0.66
SKA3-202ENST00000314759 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 TEX50A0A1B0GTY4 177 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 ALKBH2Q6NS38 261 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 SPACA3Q8IXA5 215 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms