RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 C16orf95Q9H693 158 aa14.25□□□□□ -0.13
HMGA1-201ENST00000311487 A0A1B0GU03 582 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 SSSCA1O60232 199 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 JTBO76095 146 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 NDUFA7O95182 113 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 OR13C7P0DN81 318 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 HSPE1P61604 102 aaKnown RBP14.24□□□□□ -0.13
HMGA1-201ENST00000311487 RNF141Q8WVD5 230 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 WFDC1Q9HC57 220 aa14.24□□□□□ -0.13
HMGA1-201ENST00000311487 CLPSL1A2RUU4 121 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 IGF1P05019 195 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 PVALBP20472 110 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-201ENST00000311487 MAS1LP35410 378 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 KRTAP10-3P60369 221 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 NHLH2Q02577 135 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 ZNF429Q86V71 674 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 OR2C3Q8N628 320 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 MDFIQ99750 246 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 FKBP11Q9NYL4 201 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 IGLC7A0M8Q6 106 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 FAM24AA6NFZ4 105 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 CEBPZOSA8MTT3 80 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 IAPPP10997 89 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 HOXA1P49639 335 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-201ENST00000311487 EWSR1Q01844 656 aaKnown RBP eCLIP14.23□□□□□ -0.13
HMGA1-201ENST00000311487 UBAC2Q8NBM4 344 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 OR5AU1Q8NGC0 362 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 OR5B3Q8NH48 314 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 KLK15Q9H2R5 256 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 RBKSQ9H477 322 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 COA4Q9NYJ1 87 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 STAB1Q9NY15 2570 aa14.23□□□□□ -0.13
HMGA1-201ENST00000311487 IGSF23A1L1A6 192 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 B2MP61769 119 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 TNFRSF9Q07011 255 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 AWAT1Q58HT5 328 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 OR1S2Q8NGQ3 325 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 ARV1Q9H2C2 271 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
HMGA1-201ENST00000311487 TMEM50AO95807 157 aa14.21□□□□□ -0.13
HMGA1-201ENST00000311487 ZP3P21754 424 aa14.21□□□□□ -0.13
HMGA1-201ENST00000311487 VAMP2P63027 116 aa14.21□□□□□ -0.13
HMGA1-201ENST00000311487 PRCDQ00LT1 54 aa14.21□□□□□ -0.13
HMGA1-201ENST00000311487 EIF5AL1Q6IS14 154 aaKnown RBP14.21□□□□□ -0.13
HMGA1-201ENST00000311487 LINC00052Q96N35 136 aa14.21□□□□□ -0.13
HMGA1-201ENST00000311487 LYRM2Q9NU23 88 aaPredicted RBP14.21□□□□□ -0.13
HMGA1-201ENST00000311487 PPIFP30405 207 aaKnown RBP14.21□□□□□ -0.14
HMGA1-201ENST00000311487 CAV2P51636 162 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 PROK1P58294 105 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 TMEM267Q0VDI3 215 aaPredicted RBP14.21□□□□□ -0.14
HMGA1-201ENST00000311487 AKIRIN2Q53H80 203 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 WNT10AQ9GZT5 417 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 PLA2G2EQ9NZK7 142 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 ZNF257Q9Y2Q1 563 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 S4R3C0 116 aa14.21□□□□□ -0.14
HMGA1-201ENST00000311487 IGHV3-21A0A0B4J1V1 117 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 WRBO00258 174 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 PF4V1P10720 104 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 CD28P10747 220 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 DEFA4P12838 97 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 PAX9P55771 341 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 SPCS3P61009 180 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 C19orf54Q5BKX5 351 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 TMEM252Q8N6L7 170 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 TMEM158Q8WZ71 300 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 HEYLQ9NQ87 328 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-201ENST00000311487 HSPB7Q9UBY9 170 aa14.2□□□□□ -0.14
HMGA1-201ENST00000311487 BORCS7-ASMTA0A0B4J1R7 106 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 H3BP45 60 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 FBXO24O75426 580 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 CFHR3Q02985 330 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 FOXL1Q12952 345 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 TCTEX1D4Q5JR98 221 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 SLC25A31Q9H0C2 315 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 ENY2Q9NPA8 101 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 DMRT1Q9Y5R6 373 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 A0A1W2PRX2 142 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 TMEM89A2RUT3 159 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 ZNF705EA8MWA4 302 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-201ENST00000311487 RPLP1P05386 114 aaKnown RBP14.19□□□□□ -0.14
HMGA1-201ENST00000311487 SULT1A2P50226 295 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 KHDC1LQ5JSQ8 128 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 DTD1Q8TEA8 209 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 OR5B12Q96R08 314 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 GINS3Q9BRX5 216 aa14.19□□□□□ -0.14
HMGA1-201ENST00000311487 IGHV3-48P01763 117 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 MFAP2P55001 183 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 AARDQ4LEZ3 155 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 C18orf65Q6ZTR6 163 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 MARC2Q969Z3 335 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 SMIM8Q96KF7 97 aa14.18□□□□□ -0.14
HMGA1-201ENST00000311487 KRBOX1C9JBD0 128 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 TTC9CQ8N5M4 171 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 SAT2Q96F10 170 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-201ENST00000311487 SYNGR2O43760 224 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 OR2J3O76001 311 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 IGHV3-23P01764 117 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 SLC35B1P78383 322 aa14.17□□□□□ -0.14
HMGA1-201ENST00000311487 OR52E5Q8NH55 327 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms