RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 NTN3O00634 580 aaPredicted RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 LINC00614P0C842 121 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 SLAQ13239 276 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 WDR73Q6P4I2 378 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 OR9G1Q8NH87 305 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 CLEC5AQ9NY25 188 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 DYSFO75923 2080 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 TET2Q6N021 2002 aaPredicted RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 TNRC6AQ8NDV7 1962 aaKnown RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 H3BTX0 84 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 SPRY3O43610 288 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 APELAP0DMC3 54 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 IGLC2P0DOY2 106 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 MORN2Q502X0 79 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 OR4A47Q6IF82 309 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 KLHDC1Q8N7A1 406 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 BLNKQ8WV28 456 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 CLEC7AQ9BXN2 247 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 CXXC4Q9H2H0 198 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 SLC45A2Q9UMX9 530 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 A0A1W2PN81 502 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 LNP1A1A4G5 178 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 SH2D7A6NKC9 451 aaPredicted RBP11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 J3QR06 171 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TCTAP57738 103 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TMEM164Q5U3C3 297 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 CBY3A6NI87 242 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 CCL25O15444 150 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TNXAQ16473 311 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TXNDC17Q9BRA2 123 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 GNB1LQ9BYB4 327 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 SP1P08047 785 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 ADH4P08319 380 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF137PP52743 207 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TMEM136Q6ZRR5 245 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 GP6Q9HCN6 339 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
SCUBE2-201ENST00000309263 PYYP10082 97 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 CX3CL1P78423 397 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 S100A7P31151 101 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 REG1BP48304 166 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 GAGE1Q13065 139 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 ZNF766Q5HY98 468 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 OR5B3Q8NH48 314 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 WISP2O76076 250 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 AMY1AP04745 511 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 Q0VG73 95 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 SPRR3Q9UBC9 169 aa11.83□□□□□ -0.52
SCUBE2-201ENST00000309263 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 IQCF6A8MYZ5 107 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 OR8B2Q96RD0 313 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 HSPE1P61604 102 aaKnown RBP11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 OR2T6Q8NHC8 308 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 PMCHL2Q9BQD1 86 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 NDUFB8O95169 186 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 VWA1Q6PCB0 445 aa11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 KLF13Q9Y2Y9 288 aaPredicted RBP11.82□□□□□ -0.52
SCUBE2-201ENST00000309263 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 MT-ND6P03923 174 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 CSN3P07498 182 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 TSPOP30536 169 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 PRRX1P54821 245 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 GABRA6Q16445 453 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 PPP1R14DQ9NXH3 145 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 WASHC3Q9Y3C0 194 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 TNRC6BQ9UPQ9 1833 aaKnown RBP11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 SAA2-SAA4A0A096LPE2 208 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 TNFSF15O95150 251 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 SAA2P0DJI9 122 aaPredicted RBP11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 GNG5P63218 68 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 DUX4L9Q6RFH8 374 aaPredicted RBP11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 ZNF738Q8NE65 137 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 C1orf159Q96HA4 380 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 C9orf172C9J069 976 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 SNAI2O43623 268 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 TAS2R45P59539 299 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 NIT1Q86X76 327 aa11.81□□□□□ -0.52
SCUBE2-201ENST00000309263 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms