RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 ZNF502Q8TBZ5 544 aa17■□□□□ 0.31
SNUPN-201ENST00000308588 TRBV7-1A0A0A6YYK4 115 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 FAM90A26D6RGX4 464 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 HOXD3P31249 432 aaPredicted RBP16.99■□□□□ 0.31
SNUPN-201ENST00000308588 CLEC19AQ6UXS0 136 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 UXS1Q8NBZ7 420 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 DTD1Q8TEA8 209 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 SCARB1Q8WTV0 552 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 DCUN1D4Q92564 292 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 DLX4Q92988 240 aaPredicted RBP16.99■□□□□ 0.31
SNUPN-201ENST00000308588 MISP3Q96FF7 219 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 OR10C1Q96KK4 312 aa16.99■□□□□ 0.31
SNUPN-201ENST00000308588 I3L2K1 104 aa16.98■□□□□ 0.31
SNUPN-201ENST00000308588 BMPR1BO00238 502 aa16.98■□□□□ 0.31
SNUPN-201ENST00000308588 HTR2BP41595 481 aa16.98■□□□□ 0.31
SNUPN-201ENST00000308588 SUB1P53999 127 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNUPN-201ENST00000308588 FAM209BQ5JX69 171 aa16.98■□□□□ 0.31
SNUPN-201ENST00000308588 HIPK2Q9H2X6 1198 aa16.98■□□□□ 0.31
SNUPN-201ENST00000308588 PPP5D1E7EU14 171 aa16.97■□□□□ 0.31
SNUPN-201ENST00000308588 IGLL1P15814 213 aa16.97■□□□□ 0.31
SNUPN-201ENST00000308588 ZP3P21754 424 aa16.97■□□□□ 0.31
SNUPN-201ENST00000308588 OR4D5Q8NGN0 318 aa16.97■□□□□ 0.31
SNUPN-201ENST00000308588 TMEM170AQ8WVE7 144 aa16.97■□□□□ 0.31
SNUPN-201ENST00000308588 CCSO14618 274 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 PRAF2O60831 178 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 PTTG1O95997 202 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 MT-CO2P00403 227 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 CLEC3BP05452 202 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 ID3Q02535 119 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 OXLD1Q5BKU9 147 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 SLC24A4Q8NFF2 622 aa16.96■□□□□ 0.31
SNUPN-201ENST00000308588 RCC1LQ96I51 464 aaKnown RBP16.96■□□□□ 0.31
SNUPN-201ENST00000308588 GPN1Q9HCN4 374 aaPredicted RBP16.96■□□□□ 0.31
SNUPN-201ENST00000308588 SNRPGP15A8MWD9 76 aa16.96■□□□□ 0.3
SNUPN-201ENST00000308588 KLF5Q13887 457 aaPredicted RBP16.96■□□□□ 0.3
SNUPN-201ENST00000308588 IAH1Q2TAA2 248 aaPredicted RBP16.96■□□□□ 0.3
SNUPN-201ENST00000308588 C2orf83Q53S99 150 aa16.96■□□□□ 0.3
SNUPN-201ENST00000308588 PINX1Q96BK5 328 aaKnown RBP16.96■□□□□ 0.3
SNUPN-201ENST00000308588 MAGT1Q9H0U3 335 aa16.96■□□□□ 0.3
SNUPN-201ENST00000308588 C21orf62Q9NYP8 219 aa16.96■□□□□ 0.3
SNUPN-201ENST00000308588 F8W735 103 aaPredicted RBP16.95■□□□□ 0.3
SNUPN-201ENST00000308588 G3V4G9 280 aa16.95■□□□□ 0.3
SNUPN-201ENST00000308588 DCTN2Q13561 401 aaKnown RBP16.95■□□□□ 0.3
SNUPN-201ENST00000308588 RPEL1Q2QD12 228 aa16.95■□□□□ 0.3
SNUPN-201ENST00000308588 SAMD5Q5TGI4 173 aa16.95■□□□□ 0.3
SNUPN-201ENST00000308588 U3KQ87 197 aa16.95■□□□□ 0.3
SNUPN-201ENST00000308588 CORTO00230 105 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 OVOL1O14753 267 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 SYNGR2O43760 224 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 GGCTO75223 188 aaKnown RBP16.94■□□□□ 0.3
SNUPN-201ENST00000308588 MED6O75586 246 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 IGHV3-48P01763 117 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 GPR183P32249 361 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 ARL3P36405 182 aa16.94■□□□□ 0.3
SNUPN-201ENST00000308588 ZBTB8BQ8NAP8 495 aaPredicted RBP16.94■□□□□ 0.3
SNUPN-201ENST00000308588 IAPPP10997 89 aa16.93■□□□□ 0.3
SNUPN-201ENST00000308588 NPY1RP25929 384 aa16.93■□□□□ 0.3
SNUPN-201ENST00000308588 NKX2-1P43699 371 aaPredicted RBP16.93■□□□□ 0.3
SNUPN-201ENST00000308588 ATP6V0BQ99437 205 aa16.93■□□□□ 0.3
SNUPN-201ENST00000308588 MCRIP2Q9BUT9 160 aaKnown RBP16.93■□□□□ 0.3
SNUPN-201ENST00000308588 FNDC4Q9H6D8 234 aaPredicted RBP16.93■□□□□ 0.3
SNUPN-201ENST00000308588 ZC4H2Q9NQZ6 224 aa16.93■□□□□ 0.3
SNUPN-201ENST00000308588 NBEAL1Q6ZS30 2694 aa16.93■□□□□ 0.3
SNUPN-201ENST00000308588 OR2C1O95371 312 aa16.92■□□□□ 0.3
SNUPN-201ENST00000308588 IFNA10P01566 189 aa16.92■□□□□ 0.3
SNUPN-201ENST00000308588 SYNJ2BPP57105 145 aa16.92■□□□□ 0.3
SNUPN-201ENST00000308588 POLR2GP62487 172 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNUPN-201ENST00000308588 MLANAQ16655 118 aa16.92■□□□□ 0.3
SNUPN-201ENST00000308588 GSKIPQ9P0R6 139 aa16.92■□□□□ 0.3
SNUPN-201ENST00000308588 OR2T8A6NH00 312 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 FAM25EA8MYX2 175 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 FCGR2BP31994 310 aaPredicted RBP16.91■□□□□ 0.3
SNUPN-201ENST00000308588 MFAP4P55083 255 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 C1QL4Q86Z23 238 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 UBAC2Q8NBM4 344 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 C5orf51A6NDU8 294 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 WRBO00258 174 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 TGOLN2O43493 480 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 OPRK1P41145 380 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 Q56UQ5 140 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 NOXA1Q86UR1 476 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 RNASEH2CQ8TDP1 164 aaKnown RBP16.91■□□□□ 0.3
SNUPN-201ENST00000308588 BSCL2Q96G97 398 aaPredicted RBP16.91■□□□□ 0.3
SNUPN-201ENST00000308588 CIB3Q96Q77 187 aaPredicted RBP16.91■□□□□ 0.3
SNUPN-201ENST00000308588 TXN2Q99757 166 aa16.91■□□□□ 0.3
SNUPN-201ENST00000308588 SEC14L6B5MCN3 397 aa16.9■□□□□ 0.3
SNUPN-201ENST00000308588 ATP5IP56385 69 aaPredicted RBP16.9■□□□□ 0.3
SNUPN-201ENST00000308588 ACSM6Q6P461 480 aa16.9■□□□□ 0.3
SNUPN-201ENST00000308588 GPHB5Q86YW7 130 aa16.9■□□□□ 0.3
SNUPN-201ENST00000308588 CHRDL1Q9BU40 450 aa16.9■□□□□ 0.3
SNUPN-201ENST00000308588 MRPL36Q9P0J6 103 aaKnown RBP16.9■□□□□ 0.3
SNUPN-201ENST00000308588 C7orf66A4D0T2 115 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 C15orf62A8K5M9 175 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 CTSGP08311 255 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 ADMP35318 185 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 TATDN3Q17R31 274 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 SPSB3Q6PJ21 355 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 GSG1LQ6UXU4 331 aa16.89■□□□□ 0.29
SNUPN-201ENST00000308588 OR9G4Q8NGQ1 327 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms