RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 TMEM42Q69YG0 159 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 TCF24Q7RTU0 167 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 SPACA3Q8IXA5 215 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 TMEM133Q9H2Q1 129 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 ZSWIM8A7E2V4 1837 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 HIST1H1AQ02539 215 aaPredicted RBP8.24□□□□□ -1.09
TMOD3-201ENST00000308580 SCN8AQ9UQD0 1980 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 FER1L5A0AVI2 2057 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 SIAH2O43255 324 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 VSIRQ9H7M9 311 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 M0R3E3 92 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 MDS2Q8NDY4 140 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 DDB2Q92466 427 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 ARPC1AQ92747 370 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 UQCR10Q9UDW1 63 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 WDR83OSQ9Y284 106 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 A0A087WWC5 75 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 DLX6P56179 175 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 OR1N2Q8NGR9 330 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 ZMAT5Q9UDW3 170 aaKnown RBP8.24□□□□□ -1.09
TMOD3-201ENST00000308580 PLXNA3P51805 1871 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 SRSF6Q13247 344 aaKnown RBP8.23□□□□□ -1.09
TMOD3-201ENST00000308580 PPP1R27Q86WC6 154 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 MUC21A0A0G2JKD1 596 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 MUC21A0A140T8X8 626 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 A1L4Q6 167 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 HGFACQ04756 655 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 MUC21Q5SSG8 566 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 FNDC1Q4ZHG4 1894 aaPredicted RBP8.23□□□□□ -1.09
TMOD3-201ENST00000308580 C1QTNF9P0C862 333 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 TBR1Q16650 682 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.096e-7■■■□□ 15.2
TMOD3-201ENST00000308580 WISP1O95388 367 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 UQCRFS1P47985 274 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 RPUSD1Q9UJJ7 312 aaKnown RBP8.23□□□□□ -1.09
TMOD3-201ENST00000308580 LOC102724200A0A096LPH7 203 aaPredicted RBP8.23□□□□□ -1.09
TMOD3-201ENST00000308580 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 DMRT1Q9Y5R6 373 aa8.23□□□□□ -1.09
TMOD3-201ENST00000308580 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 NUDT3O95989 172 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 DMRTA2Q96SC8 542 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 HLA-DRB1P01911 266 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 TIMP3P35625 211 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 SYT8Q8NBV8 401 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 ZFHX2Q9C0A1 2572 aaPredicted RBP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 E9PLN8 166 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 NBR2O15453 112 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 CD69Q07108 199 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 VKORC1Q9BQB6 163 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 FBLL1A6NHQ2 334 aaKnown RBP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 SLC25A34Q6PIV7 304 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 KCNS1Q96KK3 526 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 TUBA4BQ9H853 241 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 HAX1O00165 279 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 SRSF7Q16629 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 NMSQ5H8A3 153 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 C10orf55Q5SWW7 151 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 LEMD1Q68G75 181 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 TCF21O43680 179 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 PYYP10082 97 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
TMOD3-201ENST00000308580 FAM168AQ92567 244 aa8.22□□□□□ -1.09
TMOD3-201ENST00000308580 TRBV20OR9-2A0A075B6H5 130 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 CD177Q8N6Q3 437 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 C7orf69Q9H7B7 122 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 SLC25A15Q9Y619 301 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 Q9H3A6 140 aa8.21□□□□□ -1.09
TMOD3-201ENST00000308580 HEATR1Q9H583 2144 aaKnown RBP8.21□□□□□ -1.09
TMOD3-201ENST00000308580 TAS2R60P59551 318 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 GNG5P63218 68 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 OR10W1Q8NGF6 305 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 GPR82Q96P67 336 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 RNASE7Q9H1E1 156 aaKnown RBP8.21□□□□□ -1.1
TMOD3-201ENST00000308580 RFNGQ9Y644 331 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 ZNF324O75467 553 aaPredicted RBP8.21□□□□□ -1.1
TMOD3-201ENST00000308580 ATG101Q9BSB4 218 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 ZNF524Q96C55 264 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 CIDEAO60543 219 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 FOXL2NBQ6ZUU3 175 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.1
TMOD3-201ENST00000308580 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 EFNB3Q15768 340 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 C12orf54Q6X4T0 127 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 VOPP1Q96AW1 172 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
TMOD3-201ENST00000308580 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms