RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 GGNBP1Q5YKI7 109 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PLET1Q6UQ28 207 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 UBAC2Q8NBM4 344 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SLC24A4Q8NFF2 622 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OR52B4Q8NGK2 314 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DTD1Q8TEA8 209 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DLX4Q92988 240 aaPredicted RBP8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 GAR1Q9NY12 217 aaKnown RBP8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DMRT1Q9Y5R6 373 aa8.46□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IGHV3-21A0A0B4J1V1 117 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 FAM90A26D6RGX4 464 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SAP30O75446 220 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SCGB2A1O75556 95 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RNASE2P10153 161 aaKnown RBP8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OPRK1P41145 380 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 INSL3P51460 131 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 MFAP2P55001 183 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ZNF502Q8TBZ5 544 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ZNF431Q8TF32 576 aaPredicted RBP8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 MITD1Q8WV92 249 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 BSCL2Q96G97 398 aaPredicted RBP8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OR4C12Q96R67 309 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SEC22CQ9BRL7 303 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RBKSQ9H477 322 aa8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 GPN1Q9HCN4 374 aaPredicted RBP8.45□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RPS10-NUDT3A0A1W2PQS6 291 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OR2T8A6NH00 312 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 K7EIM0 57 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 WRBO00258 174 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 TGOLN2O43493 480 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ADAP1O75689 374 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 MT-CO2P00403 227 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IFNA10P01566 189 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 CLEC3BP05452 202 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NPY1RP25929 384 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 MFAP4P55083 255 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IFITM3Q01628 133 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 BEAN1Q3B7T3 259 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 FAM106AQ4KMX7 169 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ACSM6Q6P461 480 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SPSB3Q6PJ21 355 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NRARPQ7Z6K4 114 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 UXS1Q8NBZ7 420 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OR9G4Q8NGQ1 327 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SCARB1Q8WTV0 552 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 CIB3Q96Q77 187 aaPredicted RBP8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ZC4H2Q9NQZ6 224 aa8.44□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NUPL2O15504 423 aaKnown RBP8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 GNG7O60262 68 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PRAF2O60831 178 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PITX3O75364 302 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IAPPP10997 89 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NPBWR1P48145 328 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RPP30P78346 268 aaKnown RBP8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DEFA6Q01524 100 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 KLF5Q13887 457 aaPredicted RBP8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ETFRF1Q6IPR1 90 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 C12orf45Q8N5I9 185 aaPredicted RBP8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 TXN2Q99757 166 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 U3KQ87 197 aa8.43□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 C5orf51A6NDU8 294 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 FAM25EA8MYX2 175 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 INMT-MINDY4F8WBC2 141 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 I3L2K1 104 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 OR2C1O95371 312 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 LY86O95711 162 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IL5P05113 134 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 NKX2-1P43699 371 aaPredicted RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RAB11AP62491 216 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RELQ04864 619 aaPredicted RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 BSXQ3C1V8 233 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 KPRPQ5T749 579 aaPredicted RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 REC114Q7Z4M0 266 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PALMDQ9NP74 551 aa8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 PAIP2BQ9ULR5 123 aaKnown RBP8.42□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 MPTX1A8MV57 137 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 LGALS9O00182 355 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 CCSO14618 274 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 SYNGR2O43760 224 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 IFNA4P05014 189 aa8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 FCGR2BP31994 310 aaPredicted RBP8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
CSPG4P2Y-201ENST00000306853 GPHB5Q86YW7 130 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms