RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PCNX2A6NKB5 2137 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 IGKV1-39P01597 117 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 IGKV1D-39P04432 117 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 CA7P43166 264 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 SRSF12Q8WXF0 261 aaKnown RBP11.04□□□□□ -0.64
DDX54-201ENST00000306014 ST6GALNAC6Q969X2 333 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 BTF3P20290 206 aaKnown RBP11.03□□□□□ -0.64
DDX54-201ENST00000306014 CEACAM3P40198 252 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 UCNP55089 124 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 TBR1Q16650 682 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 FAM53AQ6NSI3 398 aaPredicted RBP11.03□□□□□ -0.64
DDX54-201ENST00000306014 SSC4DQ8WTU2 575 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 PRO3102Q9H379 93 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 PEX7O00628 323 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 TFPI2P48307 235 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 OR9G1Q8NH87 305 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 SCNM1Q9BWG6 230 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 A0A1B0GUS0 222 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 A6NNC1 897 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 PCP4P48539 62 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 GOLT1AQ6ZVE7 132 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 SNRNP40Q96DI7 357 aaKnown RBP11.03□□□□□ -0.64
DDX54-201ENST00000306014 COQ2Q96H96 371 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 MGST2Q99735 147 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
DDX54-201ENST00000306014 PCDH15Q96QU1 1955 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 MED13LQ71F56 2210 aa11.03□□□□□ -0.64
DDX54-201ENST00000306014 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 UQCRFS1P47985 274 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 FAM27E3Q08E93 113 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 MUC15Q8N387 334 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.64
DDX54-201ENST00000306014 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 TECTAO75443 2155 aa11.02□□□□□ -0.64
DDX54-201ENST00000306014 C15orf62A8K5M9 175 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 IGKV1D-33P01593 117 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 IGKV1-33P01594 117 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 SAA1P0DJI8 122 aaPredicted RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 HBBP68871 147 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 PYYP10082 97 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 ATP5IP56385 69 aaPredicted RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 HILPDAQ9Y5L2 63 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 NMUP48645 174 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 TIMM23BQ5SRD1 257 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
DDX54-201ENST00000306014 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
DDX54-201ENST00000306014 ZNF503-AS2A6NEH8 195 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 HIGD1CA8MV81 97 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 NPIPB11E5RHQ5 1161 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 SS18L1O75177 396 aaPredicted RBP11.01□□□□□ -0.65
DDX54-201ENST00000306014 FOXH1O75593 365 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 GRAMD2BQ96HH9 432 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 J3QR89 54 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 CCL3L1P16619 93 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
DDX54-201ENST00000306014 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
DDX54-201ENST00000306014 C12orf54Q6X4T0 127 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 PARD6GQ9BYG4 376 aaPredicted RBP11.01□□□□□ -0.65
DDX54-201ENST00000306014 UPK2O00526 184 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 ACSF3Q4G176 576 aaPredicted RBP11.01□□□□□ -0.65
DDX54-201ENST00000306014 TMEM186Q96B77 213 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 ABCA4P78363 2273 aa11.01□□□□□ -0.65
DDX54-201ENST00000306014 GNG5P63218 68 aa11□□□□□ -0.65
DDX54-201ENST00000306014 HAPLN4Q86UW8 402 aa11□□□□□ -0.65
DDX54-201ENST00000306014 OSTCQ9NRP0 149 aa11□□□□□ -0.65
DDX54-201ENST00000306014 CLEC5AQ9NY25 188 aa11□□□□□ -0.65
DDX54-201ENST00000306014 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
DDX54-201ENST00000306014 IZUMO1RA6ND01 250 aa11□□□□□ -0.65
DDX54-201ENST00000306014 A8MWP6 167 aa11□□□□□ -0.65
DDX54-201ENST00000306014 MYOD1P15172 320 aa11□□□□□ -0.65
DDX54-201ENST00000306014 FCGR2BP31994 310 aaPredicted RBP11□□□□□ -0.65
DDX54-201ENST00000306014 CD177Q8N6Q3 437 aa11□□□□□ -0.65
DDX54-201ENST00000306014 RAB1CQ92928 201 aa11□□□□□ -0.65
DDX54-201ENST00000306014 PRDM13Q9H4Q3 707 aa11□□□□□ -0.65
DDX54-201ENST00000306014 LY6G6EA0A0G2JKS1 128 aa11□□□□□ -0.65
DDX54-201ENST00000306014 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
DDX54-201ENST00000306014 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
DDX54-201ENST00000306014 LEMD1Q68G75 181 aa11□□□□□ -0.65
DDX54-201ENST00000306014 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
DDX54-201ENST00000306014 BEND2Q8NDZ0 799 aa11□□□□□ -0.65
DDX54-201ENST00000306014 OR10W1Q8NGF6 305 aa11□□□□□ -0.65
DDX54-201ENST00000306014 U3KQA8 63 aa11□□□□□ -0.65
DDX54-201ENST00000306014 EREGO14944 169 aa11□□□□□ -0.65
DDX54-201ENST00000306014 PRR31Q5SQ13 230 aa11□□□□□ -0.65
DDX54-201ENST00000306014 DIRC2Q96SL1 478 aa11□□□□□ -0.65
DDX54-201ENST00000306014 C2orf88Q9BSF0 95 aa11□□□□□ -0.65
DDX54-201ENST00000306014 MBNL3Q9NUK0 354 aaKnown RBP11□□□□□ -0.65
DDX54-201ENST00000306014 TRAV5A0A0B4J249 113 aa10.99□□□□□ -0.65
DDX54-201ENST00000306014 A6NDN8 102 aa10.99□□□□□ -0.65
DDX54-201ENST00000306014 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms