RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P35-201ENST00000303758 RETNQ9HD89 108 aa8.17□□□□□ -1.1
HMGN1P35-201ENST00000303758 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
HMGN1P35-201ENST00000303758 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
HMGN1P35-201ENST00000303758 IGHV3OR16-8A0A075B7F1 116 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 ZNF207O43670 478 aaKnown RBP8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 GNG7O60262 68 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 YIF1AO95070 293 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 MT-CO2P00403 227 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 CD74P04233 296 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 C8orf88P0DMB2 117 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 HOXA1P49639 335 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 TMBIM6P55061 237 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 MFAP4P55083 255 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 IZUMO4Q1ZYL8 232 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 FAAP20Q6NZ36 180 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 ZNF114Q8NC26 417 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 SMIM4Q8WVI0 70 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 BCL7BQ9BQE9 202 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 RABL2AQ9UBK7 228 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 RABL2BQ9UNT1 228 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 LYSTQ99698 3801 aa8.16□□□□□ -1.1
HMGN1P35-201ENST00000303758 TEX13DA0A0J9YY54 714 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 RBMY1BA6NDE4 496 aaKnown RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 RBMY1EA6NEQ0 496 aaKnown RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 ST8SIA3O43173 380 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 B3GALNT1O75752 331 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 IGKV1-5P01602 117 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 CTSDP07339 412 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 RBMY1DP0C7P1 496 aaKnown RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 AKAIN1P0CW23 69 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 SUB1P53999 127 aaKnown RBP eCLIP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 SP6Q3SY56 376 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 SPAG8Q99932 426 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 HIPK2Q9H2X6 1198 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 C5orf66Q9H5L9 145 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 EDA2RQ9HAV5 297 aa8.15□□□□□ -1.1
HMGN1P35-201ENST00000303758 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 C15orf62A8K5M9 175 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 I3L2K1 104 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 CORTO00230 105 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 CTDSPLO15194 276 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 IGHV3-48P01763 117 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 OR5AC1P0C628 307 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 UCP1P25874 307 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 ADMP35318 185 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 RPL5P46777 297 aaKnown RBP8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 NPBWR1P48145 328 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 SURF2Q15527 256 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 LINC00322Q6ZN03 302 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 DUSP18Q8NEJ0 188 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 OR4C16Q8NGL9 310 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 DYNC2LI1Q8TCX1 351 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 TXN2Q99757 166 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 PRRT1Q99946 306 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 GGTLC1Q9BX51 225 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 NAA60Q9H7X0 242 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 UBQLN2Q9UHD9 624 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 STARD9Q9P2P6 4700 aa8.14□□□□□ -1.11
HMGN1P35-201ENST00000303758 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 CCDC160A6NGH7 325 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 K7EMT4 169 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 TSPAN4O14817 238 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 SCGB2A1O75556 95 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 CTSGP08311 255 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 DHODHQ02127 395 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 FAM219AQ8IW50 185 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 TMEM116Q8NCL8 245 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 TMEM222Q9H0R3 208 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 MCUBQ9NWR8 336 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 RSL24D1Q9UHA3 163 aaKnown RBP8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 SCP2D1Q9UJQ7 156 aa8.13□□□□□ -1.11
HMGN1P35-201ENST00000303758 IGHV3-49A0A0A0MS15 119 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 A0A0B4J293 547 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 IGHV7-4-1A0A0J9YVY3 117 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 H3BMQ9 156 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 P0C879 139 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 FCGR2BP31994 310 aaPredicted RBP8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 BMI1P35226 326 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 OPRK1P41145 380 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 ETV6P41212 452 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 OR51S1Q8NGJ8 323 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 MCFD2Q8NI22 146 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 IL17DQ8TAD2 202 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 RBPMSQ93062 196 aaKnown RBP8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 SCGB3A2Q96PL1 93 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 NXF2Q9GZY0 626 aaKnown RBP8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 SMPXQ9UHP9 88 aa8.12□□□□□ -1.11
HMGN1P35-201ENST00000303758 IGKV3-7A0A075B6H7 116 aa8.11□□□□□ -1.11
HMGN1P35-201ENST00000303758 TRAV14DV4A0A0A6YYC5 116 aa8.11□□□□□ -1.11
HMGN1P35-201ENST00000303758 A0A0G2JRQ6 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms