RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DEPPQ9NTK1 212 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 CD69Q07108 199 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 FAM131CQ96AQ9 280 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
PRKCB-201ENST00000303531 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 F8VVB4 439 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 F8VWA3 439 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 YPEL1O60688 119 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 HOXA5P20719 270 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 GAS1P54826 345 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 ST6GALNAC3Q8NDV1 305 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 YPEL2Q96QA6 119 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 RNASE7Q9H1E1 156 aaKnown RBP11.66□□□□□ -0.54
PRKCB-201ENST00000303531 C1QTNF9BB2RNN3 333 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 UPK2O00526 184 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 EP300Q09472 2414 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-201ENST00000303531 TRAV9-1A0A075B6T8 112 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 CLEC19AQ6UXS0 136 aa11.66□□□□□ -0.54
PRKCB-201ENST00000303531 NEU4Q8WWR8 484 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-201ENST00000303531 SOX21Q9Y651 276 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-201ENST00000303531 A0A0G2JMZ2 1700 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 LRRC37A2A6NM11 1700 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 PSMB11A5LHX3 300 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 PRB3Q04118 309 aaPredicted RBP11.65□□□□□ -0.54
PRKCB-201ENST00000303531 TCF23Q7RTU1 214 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 PEF1Q9UBV8 284 aaKnown RBP11.65□□□□□ -0.54
PRKCB-201ENST00000303531 MORN2Q502X0 79 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 CIARTQ8N365 385 aaPredicted RBP11.65□□□□□ -0.54
PRKCB-201ENST00000303531 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 LOC285556D6RIA3 1793 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
PRKCB-201ENST00000303531 GNG5P63218 68 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 LDLRAD4O15165 306 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 MPZP25189 248 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
PRKCB-201ENST00000303531 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.55
PRKCB-201ENST00000303531 FOXC2Q99958 501 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 MST1P26927 711 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 FGFBP3Q8TAT2 258 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
PRKCB-201ENST00000303531 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 SERF1AO75920 110 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 XIRP1Q702N8 1843 aaKnown RBP11.64□□□□□ -0.55
PRKCB-201ENST00000303531 PINLYPA6NC86 204 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 DMRTA2Q96SC8 542 aa11.64□□□□□ -0.55
PRKCB-201ENST00000303531 GTF3AQ92664 365 aaKnown RBP11.63□□□□□ -0.55
PRKCB-201ENST00000303531 ATP5LO75964 103 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 ID3Q02535 119 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 Q6AWC8 147 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 FGF16O43320 207 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 CCL20P78556 96 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 MRPL16Q9NX20 251 aaKnown RBP11.63□□□□□ -0.55
PRKCB-201ENST00000303531 TNFRSF18Q9Y5U5 241 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 A0A0G2JLM5 398 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 A0A1B0GW15 77 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 POLEQ07864 2286 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 FER1L5A0AVI2 2057 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 ADMP35318 185 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 ORMDL3Q8N138 153 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 H7C1H1 209 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 SEMA5BQ9P283 1151 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 FREM3P0C091 2139 aa11.63□□□□□ -0.55
PRKCB-201ENST00000303531 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 TMEM170AQ8WVE7 144 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 MRAP2Q96G30 205 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
PRKCB-201ENST00000303531 NBR2O15453 112 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 CACNA1EQ15878 2313 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 ZIC4Q8N9L1 334 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 IGKV1-12A0A0C4DH73 117 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 IGKV1D-12P01611 117 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 CEACAM1P13688 526 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 CRYGSP22914 178 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
PRKCB-201ENST00000303531 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
PRKCB-201ENST00000303531 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
PRKCB-201ENST00000303531 TMEM262E9PQX1 116 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 EFNA2O43921 213 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 PYYP10082 97 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 CFHR1Q03591 330 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 NRN1Q9NPD7 142 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 SMAD7O15105 426 aaKnown RBP11.61□□□□□ -0.55
PRKCB-201ENST00000303531 EMP1P54849 157 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 PLAURQ03405 335 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 PRDM13Q9H4Q3 707 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 MRPS16Q9Y3D3 137 aaKnown RBP11.61□□□□□ -0.55
PRKCB-201ENST00000303531 PGPEP1LA6NFU8 196 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 PF4P02776 101 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 IGHV3-11P01762 117 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 483.3 ms