RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FAM157AC9JC47 383 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 UBE2E1P51965 193 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 IGFBPL1Q8WX77 278 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 ADCYAP1P18509 176 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 GUCA2BQ16661 112 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 RBMS3Q6XE24 437 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 MISP3Q96FF7 219 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 SMDT1Q9H4I9 107 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 C9JQL5 133 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 COMPP49747 757 aaPredicted RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 CD69Q07108 199 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 SOHLH1Q5JUK2 328 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 SLC16A13Q7RTY0 426 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 C22orf15Q8WYQ4 148 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 RAB24Q969Q5 203 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 TBL2Q9Y4P3 447 aaKnown RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 FNDC10F2Z333 226 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 PAX2Q02962 417 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 RNASEH2CQ8TDP1 164 aaKnown RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 TBX15Q96SF7 602 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 P2RX4Q99571 388 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 IGHV4-30-2A0A087WSY4 118 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 MDKP21741 143 aaPredicted RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 BRS3P32247 399 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 CACNG8Q8WXS5 425 aa11.63□□□□□ -0.55
SHCBP1-201ENST00000303383 A0A1B0GW64 132 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 SSX7Q7RTT5 188 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 DEFA4P12838 97 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 GPX4P36969 197 aaPredicted RBP11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 DSCR9P59020 149 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 SRSF1Q07955 248 aaKnown RBP eCLIP11.62□□□□□ -0.552e-8■■■□□ 18.5
SHCBP1-201ENST00000303383 GAMTQ14353 236 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 MLANAQ16655 118 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 CFHR4Q92496 578 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 MALSU1Q96EH3 234 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 M0R036 132 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 CRYGBP07316 175 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 KHDC3LQ587J8 217 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 ETFRF1Q6IPR1 90 aa11.62□□□□□ -0.55
SHCBP1-201ENST00000303383 FAM106CPP0CH98 169 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 OR10J1P30954 320 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 SAA4P35542 130 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 MEOX2P50222 304 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 ATRAIDQ6UW56 229 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 FCN1O00602 326 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 BCL2P10415 239 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 AREGP15514 252 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 PSMB3P49720 205 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 ZNF506Q5JVG8 444 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 MT-CO2P00403 227 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 OR2T6Q8NHC8 308 aa11.61□□□□□ -0.55
SHCBP1-201ENST00000303383 IGLC7A0M8Q6 106 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 HSPB1P04792 205 aaKnown RBP11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 COL8A1P27658 744 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 FXYD3Q14802 87 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 LOC102723971A0A1B0GUV8 181 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 NPFFO15130 113 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 RHOBP62745 196 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 ICAM4Q14773 271 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
SHCBP1-201ENST00000303383 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 CORTO00230 105 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 C10orf91Q5T1B1 145 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 GSN-AS1Q9NRJ2 163 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 PUS1Q9Y606 427 aaKnown RBP eCLIP11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 NPIPB3Q92617 1050 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 MRGPRG-AS1Q2M3A8 158 aa11.59□□□□□ -0.55
SHCBP1-201ENST00000303383 YIF1AO95070 293 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 FBP1P09467 338 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 RND2P52198 227 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 NPBQ8NG41 125 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 OR1P1Q8NH06 330 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 IGHV3-21A0A0B4J1V1 117 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 VWC2LB2RUY7 222 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms