RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 ADMP35318 185 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 CIARTQ8N365 385 aaPredicted RBP17.57■□□□□ 0.4
LETM1-201ENST00000302787 NEU4Q8WWR8 484 aaPredicted RBP17.57■□□□□ 0.4
LETM1-201ENST00000302787 VSIRQ9H7M9 311 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 SPRR3Q9UBC9 169 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 OR11H12B2RN74 326 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 OR11H1Q8NG94 326 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 OR11H2Q8NH07 326 aa17.57■□□□□ 0.4
LETM1-201ENST00000302787 A0A1B0GW15 77 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 M0R381 172 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 KLHDC3Q9BQ90 382 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 CD5P06127 495 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 GNG5P63218 68 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 ZNF600Q6ZNG1 722 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 ST6GALNAC6Q969X2 333 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 SIP14410 1827 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 DUTP33316 252 aaKnown RBP17.56■□□□□ 0.4
LETM1-201ENST00000302787 SRSF7Q16629 238 aaKnown RBP eCLIP17.56■□□□□ 0.4
LETM1-201ENST00000302787 SEMA5BQ9P283 1151 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 IGKV1-27A0A075B6S5 117 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 TRAV8-6A0A0B4J262 113 aa17.56■□□□□ 0.4
LETM1-201ENST00000302787 PEF1Q9UBV8 284 aaKnown RBP17.56■□□□□ 0.4
LETM1-201ENST00000302787 LINC00587B1AMM8 73 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 Q6AWC8 147 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 GGNQ86UU5 652 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 OTORQ9NRC9 128 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 ABCA7Q8IZY2 2146 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 ASIPP42127 132 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 MBD3L1Q8WWY6 194 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 NAPSAO96009 420 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 TEX29Q8N6K0 151 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 DOCK6Q96HP0 2047 aa17.55■□□□□ 0.4
LETM1-201ENST00000302787 IGHV3OR16-8A0A075B7F1 116 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 IGHV1-18A0A0C4DH31 117 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BKO60814 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BJP06899 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BOP23527 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BBP33778 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BDP58876 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BCP62807 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST2H2BEQ16778 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BHQ93079 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BNQ99877 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 HIST1H2BMQ99879 126 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 CIRBPQ14011 172 aaKnown RBP17.54■□□□□ 0.4
LETM1-201ENST00000302787 C9JCJ5 164 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 CENPVQ7Z7K6 275 aaPredicted RBP17.54■□□□□ 0.4
LETM1-201ENST00000302787 NTN3O00634 580 aaPredicted RBP17.54■□□□□ 0.4
LETM1-201ENST00000302787 SNAI2O43623 268 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 NRN1Q9NPD7 142 aa17.54■□□□□ 0.4
LETM1-201ENST00000302787 FAM90A9PA6NNJ1 464 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 GFRA3O60609 400 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 FOXG1P55316 489 aaPredicted RBP17.53■□□□□ 0.4
LETM1-201ENST00000302787 GCSAMLQ5JQS6 135 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 PAPPA-AS1Q5QFB9 102 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 FAM166AQ6J272 317 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 HEPN1Q6WQI6 88 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 FER1L6-AS1Q8NA97 138 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 WDR83OSQ9Y284 106 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 CEACAM4O75871 244 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 TMEM105Q8N8V8 129 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 CD69Q07108 199 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 CLEC19AQ6UXS0 136 aa17.53■□□□□ 0.4
LETM1-201ENST00000302787 PGPEP1LA6NFU8 196 aa17.52■□□□□ 0.4
LETM1-201ENST00000302787 UBE2CO00762 179 aa17.52■□□□□ 0.4
LETM1-201ENST00000302787 PRCDQ00LT1 54 aa17.52■□□□□ 0.4
LETM1-201ENST00000302787 GEMIN7Q9H840 131 aaKnown RBP17.52■□□□□ 0.4
LETM1-201ENST00000302787 EFNB3Q15768 340 aa17.52■□□□□ 0.4
LETM1-201ENST00000302787 C17orf82Q86X59 251 aaPredicted RBP17.52■□□□□ 0.4
LETM1-201ENST00000302787 GBF1Q92538 1859 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 NBR2O15453 112 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 ATP5LO75964 103 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 PYYP10082 97 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 CEACAM1P13688 526 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 PRB3Q04118 309 aaPredicted RBP17.52■□□□□ 0.39
LETM1-201ENST00000302787 PRDM13Q9H4Q3 707 aa17.52■□□□□ 0.39
LETM1-201ENST00000302787 PNRC2Q9NPJ4 139 aaKnown RBP17.52■□□□□ 0.39
LETM1-201ENST00000302787 TCRBV4S1A1TA0A5B7 111 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 ORMDL3Q8N138 153 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 OCC1Q8TAD7 63 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 OSTCQ9NRP0 149 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 ST6GALNAC3Q8NDV1 305 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 FOXC2Q99958 501 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 TMEM133Q9H2Q1 129 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 SSBP4Q9BWG4 385 aaPredicted RBP17.51■□□□□ 0.39
LETM1-201ENST00000302787 EPDR1Q9UM22 224 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 A0A1W2PRE2 83 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 MEIG1Q5JSS6 88 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 TMEM170BQ5T4T1 132 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 COPS9Q8WXC6 57 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 NPFFO15130 113 aa17.51■□□□□ 0.39
LETM1-201ENST00000302787 SCGB3A1Q96QR1 104 aa17.5■□□□□ 0.39
LETM1-201ENST00000302787 REG4Q9BYZ8 158 aa17.5■□□□□ 0.39
LETM1-201ENST00000302787 KIF26BQ2KJY2 2108 aa17.5■□□□□ 0.39
LETM1-201ENST00000302787 C1QL4Q86Z23 238 aa17.5■□□□□ 0.39
LETM1-201ENST00000302787 DMRTA2Q96SC8 542 aa17.5■□□□□ 0.39
LETM1-201ENST00000302787 SPTA1P02549 2419 aa17.49■□□□□ 0.39
LETM1-201ENST00000302787 ZCCHC24Q8N2G6 241 aaKnown RBP17.49■□□□□ 0.39
LETM1-201ENST00000302787 APC2O95996 2303 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms