RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 HIST1H2BDP58876 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST1H2BCP62807 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST2H2BEQ16778 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST1H2BHQ93079 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST1H2BNQ99877 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HIST1H2BMQ99879 126 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 HS3ST3B1Q9Y662 390 aa9.58□□□□□ -0.88
GCN1-201ENST00000300648 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
GCN1-201ENST00000300648 C1QTNF9P0C862 333 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 LDLRAD2Q5SZI1 272 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 TMEM144Q7Z5S9 345 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 KLF14Q8TD94 323 aaPredicted RBP9.57□□□□□ -0.88
GCN1-201ENST00000300648 PLSCR4Q9NRQ2 329 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 HRKO00198 91 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 SAMD5Q5TGI4 173 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 ZNF501Q96CX3 271 aaPredicted RBP9.57□□□□□ -0.88
GCN1-201ENST00000300648 A0A1B0GTI1 187 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 SERF1AO75920 110 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 FOXL1Q12952 345 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 PILRAQ9UKJ1 303 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 HILPDAQ9Y5L2 63 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 MGAMO43451 1857 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 TNFSF13O75888 250 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 RFLNBQ8N5W9 214 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 AGFG2O95081 481 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 PLAUP00749 431 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 CCL8P80075 99 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 TMEM95Q3KNT9 176 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 LINC01565O15544 149 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
GCN1-201ENST00000300648 LOC105371242A0A075B767 164 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 C9orf172C9J069 976 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 EIF4EBP2Q13542 120 aaPredicted RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 C16orf47Q6ZP98 133 aaPredicted RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 MEGF9Q9H1U4 602 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 RIPPLY3P57055 190 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 ICAM4Q14773 271 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 Q6ZT83 130 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 ITLN1Q8WWA0 313 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 ARPC1AQ92747 370 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 LY96Q9Y6Y9 160 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 DEFB124Q8NES8 71 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 RSPO3Q9BXY4 272 aaPredicted RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 IGKCP01834 107 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 PEBP1P30086 187 aaKnown RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 HEPN1Q6WQI6 88 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 CCL21O00585 134 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 GLRXP35754 106 aa9.56□□□□□ -0.88
GCN1-201ENST00000300648 IGLV3-21P80748 117 aaPredicted RBP9.56□□□□□ -0.88
GCN1-201ENST00000300648 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 Q9H3A6 140 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 C9JCJ5 164 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 R3HDMLQ9H3Y0 253 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 ACP7Q6ZNF0 438 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 COQ2Q96H96 371 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 ZNF205O95201 554 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 LINC01590Q5TEZ4 76 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 LINC00312Q9Y6C7 94 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 C18orf15Q96N68 181 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 MED12LQ86YW9 2145 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
GCN1-201ENST00000300648 PMVKQ15126 192 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 M0R2P5 195 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 CD160O95971 181 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 FHL5Q5TD97 284 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 SSBP3Q9BWW4 388 aaPredicted RBP9.55□□□□□ -0.88
GCN1-201ENST00000300648 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
GCN1-201ENST00000300648 A0A0G2JMZ2 1700 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 LRRC37A2A6NM11 1700 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 CGAP01215 116 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 LINC00271P0C7V0 271 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 MALP21145 153 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 M0R381 172 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
GCN1-201ENST00000300648 A0A1W2PPE3 182 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 FOXA3P55318 350 aaPredicted RBP9.54□□□□□ -0.88
GCN1-201ENST00000300648 FGF16O43320 207 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 DTX4Q9Y2E6 619 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 TRGV11A0A075B6L2 103 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 IGHV1-69-2A0A0G2JMI3 117 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 PIN1P1O15428 100 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 SCO2A0A1W2PP80 73 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
GCN1-201ENST00000300648 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 PILRBQ9UKJ0 227 aa9.54□□□□□ -0.88
GCN1-201ENST00000300648 C15orf61A6NNL5 157 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms