RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 USP9XQ93008 2570 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-202ENST00000297979 A0A1B0GV50 99 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 RNASEK-C17orf49H0YIS7 233 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 TCF21O43680 179 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 DVL1P1P54792 670 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-202ENST00000297979 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-202ENST00000297979 ATP5IP56385 69 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-202ENST00000297979 ZNF709Q8N972 641 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 RAB24Q969Q5 203 aa11.47□□□□□ -0.57
C9orf3-202ENST00000297979 TIMM23O14925 209 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 FOXH1O75593 365 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 TGFAP01135 160 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 APOC3P02656 99 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 CD5P06127 495 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 COX6B1P14854 86 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 HOXB4P17483 251 aaPredicted RBP11.46□□□□□ -0.57
C9orf3-202ENST00000297979 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 LPAR2Q9HBW0 351 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 TNCP24821 2201 aa11.46□□□□□ -0.57
C9orf3-202ENST00000297979 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 INS-IGF2F8WCM5 200 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 EREGO14944 169 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 ATP5J2P56134 94 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 PSG5Q15238 335 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 BSXQ3C1V8 233 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 OR10W1Q8NGF6 305 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 RNF5Q99942 180 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.58
C9orf3-202ENST00000297979 MPDU1O75352 247 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 SAP30O75446 220 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 HBE1P02100 147 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 CRYGBP07316 175 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 CNTFRP26992 372 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 GUK1Q16774 197 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 C10orf55Q5SWW7 151 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 PBDC1Q9BVG4 233 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 COL12A1Q99715 3063 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 FLNCQ14315 2725 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 A0A1W2PRF3 423 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 A0A1W2PRM7 423 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 H0Y8G0 127 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 ERHP84090 104 aaKnown RBP11.45□□□□□ -0.58
C9orf3-202ENST00000297979 ACSM6Q6P461 480 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 MMD2Q8IY49 270 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 AKAP6Q13023 2319 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 E7EUB6 86 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 TOX4O94842 621 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 VENTXO95231 258 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 RNASE2P10153 161 aaKnown RBP11.45□□□□□ -0.58
C9orf3-202ENST00000297979 ADCYAP1P18509 176 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 PKIAP61925 76 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 PEA15Q15121 130 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 PRSS8Q16651 343 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 SP5Q6BEB4 398 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-202ENST00000297979 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
C9orf3-202ENST00000297979 TRAV1-1A0A0B4J248 108 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 A1L4Q6 167 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 TGOLN2O43493 480 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 CRYBA1P05813 215 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 CCL20P78556 96 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 CFHR4Q92496 578 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 EIF5A2Q9GZV4 153 aaKnown RBP11.44□□□□□ -0.58
C9orf3-202ENST00000297979 KIAA1456Q9P272 454 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 METTL1Q9UBP6 276 aaKnown RBP11.44□□□□□ -0.58
C9orf3-202ENST00000297979 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
C9orf3-202ENST00000297979 TSTD3H0UI37 97 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 ZNF726P1Q15940 193 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 ARSJQ5FYB0 599 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-202ENST00000297979 MINOS1Q5TGZ0 78 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 MINOS1-NBL1R4GNA1 71 aa11.44□□□□□ -0.58
C9orf3-202ENST00000297979 A0A1B0GW15 77 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 A0A1B0GW64 132 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 FNDC10F2Z333 226 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 ACTL6BO94805 426 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 MAS1LP35410 378 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 LGALS4P56470 323 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 MBD3L1Q8WWY6 194 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-202ENST00000297979 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-202ENST00000297979 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 VWC2LB2RUY7 222 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 FAM157AC9JC47 383 aa11.43□□□□□ -0.58
C9orf3-202ENST00000297979 C9JQL5 133 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms