RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RBPJQ06330 500 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 PSG5Q15238 335 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 HLA-DRB5Q30154 266 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 PYY3Q5JQD4 70 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 MSRB2Q9Y3D2 182 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 K7EN84 100 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
RHO-201ENST00000296271 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 TMEM177Q53S58 311 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 TGIF2LXQ8IUE1 241 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 A0A1B0GUS0 222 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 SLC17A3O00476 420 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
RHO-201ENST00000296271 OR5I1Q13606 314 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 ZNF841Q6ZN19 808 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 OSR1Q8TAX0 266 aaPredicted RBP9.49□□□□□ -0.89
RHO-201ENST00000296271 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 KCNIP2Q9NS61 270 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 PRB4P10163 310 aaPredicted RBP9.49□□□□□ -0.89
RHO-201ENST00000296271 CD24P25063 80 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 RHOBP62745 196 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 NHLH1Q02575 133 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 CD69Q07108 199 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 FBLN7Q53RD9 439 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 C2orf83Q53S99 150 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 HIST3H2BBQ8N257 126 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 OR4C13Q8NGP0 309 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 GSX1Q9H4S2 264 aaPredicted RBP9.49□□□□□ -0.89
RHO-201ENST00000296271 NGBQ9NPG2 151 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
RHO-201ENST00000296271 TRBV23-1A0A0A0MS06 115 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 A0A1W2PRD5 423 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 A0A1W2PRF3 423 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 A0A1W2PRM7 423 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 OR7C2O60412 319 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 FABP4P15090 132 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 AREGP15514 252 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 CA7P43166 264 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 MFAP2P55001 183 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 OR1L8Q8NGR8 309 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 NPIPB3Q92617 1050 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 TMEM133Q9H2Q1 129 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 PDE6DO43924 150 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 S100A8P05109 93 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 S100A9P06702 114 aaKnown RBP9.48□□□□□ -0.89
RHO-201ENST00000296271 LY6DQ14210 128 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 OR5B12Q96R08 314 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 MIOXQ9UGB7 285 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 FUT9Q9Y231 359 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 WASHC3Q9Y3C0 194 aa9.48□□□□□ -0.89
RHO-201ENST00000296271 IGHV2-26A0A0B4J1V2 119 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 VSTM5A8MXK1 200 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 B9A039 149 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 MOSP00540 346 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 SMIM6P0DI80 62 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 PYYP10082 97 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 CRYBB3P26998 211 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 PPOXP50336 477 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 ZNF672Q499Z4 452 aaPredicted RBP9.47□□□□□ -0.89
RHO-201ENST00000296271 TMEM167AQ8TBQ9 72 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 LY86O95711 162 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 IL3RAP26951 378 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 RAB31Q13636 194 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 OR2T10Q8NGZ9 312 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 SRD5A3Q9H8P0 318 aa9.47□□□□□ -0.89
RHO-201ENST00000296271 IGKV1D-37A0A075B6S9 117 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 GGTLC3B5MD39 225 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 FCN1O00602 326 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 S100PP25815 95 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 PATE2Q6UY27 113 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 PNKDQ8N490 385 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 NHLRC2Q8NBF2 726 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 SFRP2Q96HF1 295 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.89
RHO-201ENST00000296271 A0A1W2PPR1 153 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 C22orf46C9J442 243 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 PPP5D1E7EU14 171 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 F6UZH7 168 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 PPP1R2P9O14990 202 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 NDUFS7O75251 213 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 USF1P22415 310 aaPredicted RBP9.46□□□□□ -0.9
RHO-201ENST00000296271 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
RHO-201ENST00000296271 KLRD1Q13241 179 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 TNXAQ16473 311 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 PDPNQ86YL7 162 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 MISP3Q96FF7 219 aa9.46□□□□□ -0.9
RHO-201ENST00000296271 GAR1Q9NY12 217 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms