RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ORM1P02763 201 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 Q6AWC8 147 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 NRGNQ92686 78 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 TMEM54Q969K7 222 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 Q96M66 194 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 JMJD8Q96S16 334 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 KLK15Q9H2R5 256 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 PKD1L3Q7Z443 1732 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 TDRD6O60522 2096 aaKnown RBP9.8□□□□□ -0.84
SNIP1-201ENST00000296215 LY6G5CQ5SRR4 150 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 C1orf195Q5TG92 126 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 SCRT1Q9BWW7 348 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 ALKBH4Q9NXW9 302 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 RREB1Q92766 1687 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 NUP188Q5SRE5 1749 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 K7ESF4 209 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 SRYQ05066 204 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 MRPL20Q9BYC9 149 aaKnown RBP9.8□□□□□ -0.84
SNIP1-201ENST00000296215 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 MYF5P13349 255 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 UCNP55089 124 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 CBLN3Q6UW01 205 aa9.8□□□□□ -0.84
SNIP1-201ENST00000296215 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 ZIC3O60481 467 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 LEPP41159 167 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 XGP55808 180 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 ACP7Q6ZNF0 438 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 C10orf35Q96D05 121 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 GTF3C1Q12789 2109 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 PRSS12P56730 875 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 GATD1Q8NB37 220 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 ANKRD31Q8N7Z5 1873 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 MARF1Q9Y4F3 1742 aaKnown RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 TNFRSF1AP19438 455 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 SNRNP40Q96DI7 357 aaKnown RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 SCARF2Q96GP6 870 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 KLF13Q9Y2Y9 288 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-201ENST00000296215 ALS2Q96Q42 1657 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 OR11H6Q8NGC7 330 aa9.79□□□□□ -0.84
SNIP1-201ENST00000296215 PEX7O00628 323 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 OCIAD1Q9NX40 245 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 LRP5O75197 1615 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 FXYD2P54710 66 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 C1QL2Q7Z5L3 287 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 TEX45Q8NA69 505 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 CDX4O14627 284 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-201ENST00000296215 MDP1Q86V88 176 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 PCP2Q8IVA1 136 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 ANKRD29Q8N6D5 301 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 RND1Q92730 232 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 PLPPR2Q96GM1 343 aa9.78□□□□□ -0.84
SNIP1-201ENST00000296215 KLF16Q9BXK1 252 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-201ENST00000296215 DLX6P56179 175 aa9.77□□□□□ -0.84
SNIP1-201ENST00000296215 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.84
SNIP1-201ENST00000296215 ZFP36L1Q07352 338 aaKnown RBP9.77□□□□□ -0.84
SNIP1-201ENST00000296215 C2orf27AQ580R0 203 aa9.77□□□□□ -0.84
SNIP1-201ENST00000296215 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.84
SNIP1-201ENST00000296215 FAM57AQ8TBR7 257 aa9.77□□□□□ -0.84
SNIP1-201ENST00000296215 NPIPB3Q92617 1050 aa9.77□□□□□ -0.84
SNIP1-201ENST00000296215 DNAL4O96015 105 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 FXYD7P58549 80 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 SFTPA2Q8IWL1 248 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 SFTPA1Q8IWL2 248 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 WNT6Q9Y6F9 365 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 A0A0A6YYD4 124 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 TAL2Q16559 108 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 TMEM219Q86XT9 240 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 SLC37A2Q8TED4 501 aa9.77□□□□□ -0.85
SNIP1-201ENST00000296215 FRG2CA6NGY1 282 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 NGFP01138 241 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
SNIP1-201ENST00000296215 HOXA4Q00056 320 aaPredicted RBP9.76□□□□□ -0.85
SNIP1-201ENST00000296215 V9GYV3 84 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 UQCRQO14949 82 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 ZNF658BQ4V348 819 aaPredicted RBP9.76□□□□□ -0.85
SNIP1-201ENST00000296215 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 MIR17HGQ75NE6 70 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
SNIP1-201ENST00000296215 NDUFA7O95182 113 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 IGFBP6P24592 240 aaPredicted RBP9.76□□□□□ -0.85
SNIP1-201ENST00000296215 WFDC5Q8TCV5 224 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 TCRBV4S1A1TA0A5B7 111 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 AAED1Q7RTV5 226 aa9.76□□□□□ -0.85
SNIP1-201ENST00000296215 LOC101059948A0A1B0GTJ6 334 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 A0A1W2PNR3 127 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 TMEM30CPA0ZSE6 113 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 DEFB108AA8MXU0 73 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms