RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PAGE4O60829 102 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 CXorf1O96002 111 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 MT-ND4LP03901 98 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 MAS1LP35410 378 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 LDLRAD2Q5SZI1 272 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 ISOC2Q96AB3 205 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 A0A1W2PPI3 338 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 OR2C1O95371 312 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 RPL27AP46776 148 aaKnown RBP7.34□□□□□ -1.23
PDPN-201ENST00000294489 PRR20EP86478 221 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 PRR20CP86479 221 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 PRR20DP86480 221 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 PRR20BP86481 221 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 PRR20AP86496 221 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 FLI1Q01543 452 aaPredicted RBP7.34□□□□□ -1.23
PDPN-201ENST00000294489 PSG5Q15238 335 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 TNXAQ16473 311 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 TPTE2P1Q5T6R2 138 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 SLC16A13Q7RTY0 426 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 C10orf105Q8TEF2 133 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 SMIM7Q9BQ49 75 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 BPESC1Q9GZL8 116 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 METTL1Q9UBP6 276 aaKnown RBP7.34□□□□□ -1.23
PDPN-201ENST00000294489 SLC45A2Q9UMX9 530 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 SIGLEC9Q9Y336 463 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 CGB1A6NKQ9 187 aa7.34□□□□□ -1.24
PDPN-201ENST00000294489 PCP4P48539 62 aa7.34□□□□□ -1.24
PDPN-201ENST00000294489 PPP1R27Q86WC6 154 aa7.34□□□□□ -1.24
PDPN-201ENST00000294489 ABHD5Q8WTS1 349 aa7.34□□□□□ -1.24
PDPN-201ENST00000294489 TNCP24821 2201 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 C11orf94C9JXX5 98 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 CRYBA1P05813 215 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 ARL14EPLP0DKL9 152 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 OR10J1P30954 320 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 PLGLAQ15195 96 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 SPNS3Q6ZMD2 512 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 GATAD1Q8WUU5 269 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 HIST1H2BAQ96A08 127 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 ACY3Q96HD9 319 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 TXNDC17Q9BRA2 123 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 C19orf24Q9BVV8 132 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 SDF2L1Q9HCN8 221 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 CACNA1BQ00975 2339 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 PDE6DO43924 150 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
PDPN-201ENST00000294489 CNTFRP26992 372 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 RNF212Q495C1 297 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 CFHR4Q92496 578 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 RPUSD4Q96CM3 377 aaKnown RBP7.33□□□□□ -1.24
PDPN-201ENST00000294489 SEPSECSQ9HD40 501 aaKnown RBP7.33□□□□□ -1.24
PDPN-201ENST00000294489 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
PDPN-201ENST00000294489 CXorf65A6NEN9 183 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 TIMM23O14925 209 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 LINC00869P0C866 280 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 COMPP49747 757 aaPredicted RBP7.32□□□□□ -1.24
PDPN-201ENST00000294489 GNB1P62873 340 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 MLANAQ16655 118 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 TMEM241Q24JQ0 296 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 ETFRF1Q6IPR1 90 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 HILPDAQ9Y5L2 63 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 IGKV1OR2-108A0A075B7D4 117 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FOLR2P14207 255 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 UBE2G2P60604 165 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 PVRIGQ6DKI7 326 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 CYP2G1PQ6ZSU1 146 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 VMO1Q7Z5L0 202 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 OR2T6Q8NHC8 308 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 PIMREGQ9BSJ6 248 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 PARLQ9H300 379 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 IGLC7A0M8Q6 106 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 CLN5O75503 358 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 VENTXO95231 258 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 REG1AP05451 166 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 MINOS1Q5TGZ0 78 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 CCDC144NLQ6NUI1 221 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 ZNF114Q8NC26 417 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FBXL15Q9H469 300 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 MINOS1-NBL1R4GNA1 71 aa7.32□□□□□ -1.24
PDPN-201ENST00000294489 FLNCQ14315 2725 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 F6UZH7 168 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 CORTO00230 105 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 FOXH1O75593 365 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 COX6B1P14854 86 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 GCHFRP30047 84 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 LGALS4P56470 323 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 DSCR9P59020 149 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 TAS2R45P59539 299 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 KLRD1Q13241 179 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 MMDQ15546 238 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms